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The map label for this gene is 222102428

Identifier: 222102428

GI number: 222102428

Start: 22680

End: 23708

Strand: Direct

Name: 222102428

Synonym: Avi_7022

Alternate gene names: NA

Gene position: 22680-23708 (Clockwise)

Preceding gene: 222102427

Following gene: 222102434

Centisome position: 3.59

GC content: 59.09

Gene sequence:

>1029_bases
ATGCGTACCAACAAGGTTATTCATGTTATCGGGGTCCACGCGGAAGGGGAGGTTGGCGATGTGATTGTCGGTGGCGTCTC
ACCCCCACCGGGTGACACGCTTTGGGAGCAGTCGCGTTTTATTGCCAGCGACGAGACCTTGCGAAACTTTGTGCTGAATG
AGCCACGCGGCGGGGTGTTCCGGCATGTCAATCTGCTGGTCCCGCCGAAAGACCCGCGCGCCCAGATGGGCTTCATTATC
ATGGAGCCAGCCGACACGCCGCCGATGTCAGGCTCGAACTCTATCTGTGTTTCGACCGCCATTCTCGACAGCGGCATCAT
TTCGATGCAGGAACCGCTAACGCATATGGTCCTGGAAGCACCAGGCGGTGTCATCGAGGTGACGGCAGAATGTGCCAATG
GCAAGGCCGAGCGGATCAATGTGCTGAATGTGGCTTCTTTCGTAACACGGCTCGCCGCCGCGCTGGAAGTCGAGGGGCTC
GGCACCCTGACGGTCGATACCGCCTATGGCGGCGACAGTTTCGTGATTGTCGATGCGATCGGCCTCGGCTTCTCGCTCAA
GCCCGACGAGGCGAGGGAACTGGCGGAACTCGGTATGAAGATCACCGCTGCCGCCAATGAACAGCTCGGGTTCGTGCATC
CGTGTAATGCGGATTGGAACCATATCTCCTTCTGCCAGATGACTACGCCAATCACGCGCGAAAACGGCATCCTGACTGGC
AAGAGCGCCGTTGCGATCCGTCCCGGCAAGATCGATCGCTCTCCAACGGGAACCGGCTGTTCTGCCCGACTTGCCGTCAT
GCATGCGCGGGGAGAAATCGGAATTGGTGAGACCTATATCGGGCGCTCGATCATTGACTCCGAATTCAAGTGCCACATCG
ACTCTCTTACAGAGATTGGGGGGCTTAGCGCCATTCGCCCCGTCATTTCCGGCCGCGCCTGGATAACCGGAGTGTCCCAG
TTGATGCTCGACCCGACAGACCCGTGGCCGTCAGGCTACCAGCTTTCGGATACCTGGCCAGCGATTTGA

Upstream 100 bases:

>100_bases
GGGTCTCGATCATGTGACGGCCTGCCTGCGCGATGATATCCTTTAGCAGAGTTATGCCGAAACCGGGTCCACCACAGATA
GCAATTAAGGGAACGTTCGA

Downstream 100 bases:

>100_bases
ACCAAGACAGGGCTATCACGGCGTTGTTGCAGCGTTCAGCGACAGGTGATCATTCAGTCTTTGATGGGACGCTTATTTGG
TTGCTCGGCACTGTAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRTNKVIHVIGVHAEGEVGDVIVGGVSPPPGDTLWEQSRFIASDETLRNFVLNEPRGGVFRHVNLLVPPKDPRAQMGFII
MEPADTPPMSGSNSICVSTAILDSGIISMQEPLTHMVLEAPGGVIEVTAECANGKAERINVLNVASFVTRLAAALEVEGL
GTLTVDTAYGGDSFVIVDAIGLGFSLKPDEARELAELGMKITAAANEQLGFVHPCNADWNHISFCQMTTPITRENGILTG
KSAVAIRPGKIDRSPTGTGCSARLAVMHARGEIGIGETYIGRSIIDSEFKCHIDSLTEIGGLSAIRPVISGRAWITGVSQ
LMLDPTDPWPSGYQLSDTWPAI

Sequences:

>Translated_342_residues
MRTNKVIHVIGVHAEGEVGDVIVGGVSPPPGDTLWEQSRFIASDETLRNFVLNEPRGGVFRHVNLLVPPKDPRAQMGFII
MEPADTPPMSGSNSICVSTAILDSGIISMQEPLTHMVLEAPGGVIEVTAECANGKAERINVLNVASFVTRLAAALEVEGL
GTLTVDTAYGGDSFVIVDAIGLGFSLKPDEARELAELGMKITAAANEQLGFVHPCNADWNHISFCQMTTPITRENGILTG
KSAVAIRPGKIDRSPTGTGCSARLAVMHARGEIGIGETYIGRSIIDSEFKCHIDSLTEIGGLSAIRPVISGRAWITGVSQ
LMLDPTDPWPSGYQLSDTWPAI
>Mature_342_residues
MRTNKVIHVIGVHAEGEVGDVIVGGVSPPPGDTLWEQSRFIASDETLRNFVLNEPRGGVFRHVNLLVPPKDPRAQMGFII
MEPADTPPMSGSNSICVSTAILDSGIISMQEPLTHMVLEAPGGVIEVTAECANGKAERINVLNVASFVTRLAAALEVEGL
GTLTVDTAYGGDSFVIVDAIGLGFSLKPDEARELAELGMKITAAANEQLGFVHPCNADWNHISFCQMTTPITRENGILTG
KSAVAIRPGKIDRSPTGTGCSARLAVMHARGEIGIGETYIGRSIIDSEFKCHIDSLTEIGGLSAIRPVISGRAWITGVSQ
LMLDPTDPWPSGYQLSDTWPAI

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=357, Percent_Identity=25.4901960784314, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36363; Mature: 36363

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNKVIHVIGVHAEGEVGDVIVGGVSPPPGDTLWEQSRFIASDETLRNFVLNEPRGGVF
CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCEEECHHHHHHHHHCCCCCCEE
RHVNLLVPPKDPRAQMGFIIMEPADTPPMSGSNSICVSTAILDSGIISMQEPLTHMVLEA
EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHCC
PGGVIEVTAECANGKAERINVLNVASFVTRLAAALEVEGLGTLTVDTAYGGDSFVIVDAI
CCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEE
GLGFSLKPDEARELAELGMKITAAANEQLGFVHPCNADWNHISFCQMTTPITRENGILTG
CCCCEECCHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEC
KSAVAIRPGKIDRSPTGTGCSARLAVMHARGEIGIGETYIGRSIIDSEFKCHIDSLTEIG
CCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCHHHHCCCCEEEHHHHHHHC
GLSAIRPVISGRAWITGVSQLMLDPTDPWPSGYQLSDTWPAI
CHHHHHHHHCCCHHHEEHHHHEECCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MRTNKVIHVIGVHAEGEVGDVIVGGVSPPPGDTLWEQSRFIASDETLRNFVLNEPRGGVF
CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCEEECHHHHHHHHHCCCCCCEE
RHVNLLVPPKDPRAQMGFIIMEPADTPPMSGSNSICVSTAILDSGIISMQEPLTHMVLEA
EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHCC
PGGVIEVTAECANGKAERINVLNVASFVTRLAAALEVEGLGTLTVDTAYGGDSFVIVDAI
CCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEE
GLGFSLKPDEARELAELGMKITAAANEQLGFVHPCNADWNHISFCQMTTPITRENGILTG
CCCCEECCHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEC
KSAVAIRPGKIDRSPTGTGCSARLAVMHARGEIGIGETYIGRSIIDSEFKCHIDSLTEIG
CCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCHHHHCCCCEEEHHHHHHHC
GLSAIRPVISGRAWITGVSQLMLDPTDPWPSGYQLSDTWPAI
CHHHHHHHHCCCHHHEEHHHHEECCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]