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The map label for this gene is ylxY [H]

Identifier: 222097251

GI number: 222097251

Start: 3550413

End: 3551312

Strand: Reverse

Name: ylxY [H]

Synonym: BCQ_3591

Alternate gene names: 222097251

Gene position: 3551312-3550413 (Counterclockwise)

Preceding gene: 222097252

Following gene: 222097250

Centisome position: 68.11

GC content: 35.33

Gene sequence:

>900_bases
ATGAAAGCTCGTATATTGGCATACATATGTATATTCTTTTTATATGTCAGTGTAGGCTCTTATTCCGTTTTTGCACAGGA
TAACTTATATGAAGAAATTCAAAAGCATGCAAAACAATATGAGATTGCACCGCAAAATGCGATGATTGATAAGATATGGA
AAGCCACACCAGGATATAATGGAAGACAAGTTGATATGGAAGCATCCTATAAAAATATGAAGAAGTTAAAGAAATTTGAT
CAAAAACATCTTGAATTCAAGGAAGTATCACCGAGTGTCCACTTAGAAGATTTATCACCAGCACCAATTTATAGAGGTCA
TCCGGATAAAAAGATGGTCGGGTTAACAATAAATGTGGCATGGGGAAATGAATATTTGCCTCGTATATTAGAAATATTGA
AAAAGCATGATGTGAAGGCGACTTTCTTTTTAGAAGGACGTTGGGTGAAAGAAAATTTACGATTTGCAAAAATGATTGTC
GATGCAAATCAAGAAGTTGGAAATCATTCTTACACACACCCTAATATGAAAACGTTATCGTCTGATGAAATAAGAGATCA
GTTACAAAAAACAAATCGAATGATCGAAGCAGCTACGAATCAAAAGGTAAGATGGTTTGCACCGCCGAGTGGAAGTTTTC
GGGATGAAGTCGTGAAAATTGCAGATGATTTTCAAATGGGAACGATTATGTGGACTGTTGATACAATTGATTGGAAGCGA
CCTGAGCCAGGTGTACTATTGCAGAGAGTAATGAGAAAAATACATCCAGGTGCTATCGTATTAATGCATCCTACTTCGTC
CACAACAGAAGCATTAGATACAATGATTACAAAATTGAAGGAACAAGGATATAAAGTAGGGAATATAACAGAATTACTGG
ATGAAAAACGTGTAGATTAA

Upstream 100 bases:

>100_bases
TATATTTTTATGTCAGTATAGGTATAGTTTTCATTATAACGCTCAAATTAACAAAGATAAGAAGAAAAATGGTTTTTATA
TAGTTAATGGGAGGGTTTAT

Downstream 100 bases:

>100_bases
ATACATTTGCATGACATTCATCCTTAAACTTGTTATCATTAAATAATAGCACTTATTTAGAGAAACTGGCAGTAGGAGGA
AAGTTTTTGATTAAAAAATA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKHAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYKNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPDKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPGVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD

Sequences:

>Translated_299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKHAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYKNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPDKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPGVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
>Mature_299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKHAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYKNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPDKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPGVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 34592; Mature: 34592

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKHAKQYEIAPQNAMIDKIWKATPGYN
CCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GRQVDMEASYKNMKKLKKFDQKHLEFKEVSPSVHLEDLSPAPIYRGHPDKKMVGLTINVA
CEEEEHHHHHHHHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
WGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIVDANQEVGNHSYTHPNMKTLS
CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
PEPGVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKHAKQYEIAPQNAMIDKIWKATPGYN
CCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GRQVDMEASYKNMKKLKKFDQKHLEFKEVSPSVHLEDLSPAPIYRGHPDKKMVGLTINVA
CEEEEHHHHHHHHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
WGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIVDANQEVGNHSYTHPNMKTLS
CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
PEPGVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]