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The map label for this gene is ydhB [H]

Identifier: 222097136

GI number: 222097136

Start: 3428012

End: 3428737

Strand: Reverse

Name: ydhB [H]

Synonym: BCQ_3476

Alternate gene names: 222097136

Gene position: 3428737-3428012 (Counterclockwise)

Preceding gene: 222097137

Following gene: 222097134

Centisome position: 65.76

GC content: 36.5

Gene sequence:

>726_bases
ATGGGGATTTTATTAGGGTTTGTTGGAGCTGGGGGAGCCGGGTTTATTATCGCGATACTCACTTTAGTATTCCATATTCC
TATTCACGTTGCACTTGCAACGTCTTTAACTGCTATGGCATTTACGACATTATCTGGGGTTATAAGTCATTATCGTGAAG
GAAATGTAGTACTTACTATAGGCGGGATTGTTGGGGGATGTGGAGCGCTTGGTTCTTATATCGGTTCAAAAATTGGTTCA
CTTATACCAGGACATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATCTGCAATTTTTATGTTTATTAAATTAAT
TAAGTTTCAAAATAGGGAAGAGTTACTTTTAGCAGAGATTAAAGATTTTTCGAAAGAGAACATAATGAAATGTATATGTC
TTGGATTAGTCACTGGAATGATGGCTGGTTCATTTGGGATTGGTTCTGCACCATTTATTCAACTTGGATTAATGGTTCTA
TTAGGATTGACGATTCAGCAATCTGTAGGAACAACAATGCTTGTTATATTGCCCATTGCGATTGGGGGTGGTTTAGGGTA
TAGTTCAGAAGGGTATCTAGATTATATATTATTGCAAGTATTAATTGGGACGATGCTAGGAGCTTATATCGGTGCGAAGT
TTACAAATTATGCACCACGTATGCTTTTAAAGTTTTCAATGATTATGACACCAGTTTTCGCTGGATGTATGTTATTAATG
GGATAA

Upstream 100 bases:

>100_bases
TCCTAGATGGATGCTTTTTATTTGTGTAGAAGAAAGAATATGGTGGATAATTGCCTTACTGGAGGGAGAGTATGTGGCAA
TTATTATAACGATGTTAGTA

Downstream 100 bases:

>100_bases
AAATAATATAGCAAACTAATATGTTTTACGAATGAATTATGTAAGTAATTCATATTTCCCATATAAAAGGATTTGCTTTA
ATATAATGAGTGTAAAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGS
LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVL
LGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGCMLLM
G

Sequences:

>Translated_241_residues
MGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGS
LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVL
LGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGCMLLM
G
>Mature_240_residues
GILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSL
IPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL
GLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGCMLLMG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 25411; Mature: 25280

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
GILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTI
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GGIVGGCGALGSYIGSKIGSLIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIA
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IGGGLGYSSEGYLDYILLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGCMLLM
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]