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The map label for this gene is nudF [H]

Identifier: 222097080

GI number: 222097080

Start: 3366503

End: 3366946

Strand: Reverse

Name: nudF [H]

Synonym: BCQ_3420

Alternate gene names: 222097080

Gene position: 3366946-3366503 (Counterclockwise)

Preceding gene: 222097082

Following gene: 222097078

Centisome position: 64.57

GC content: 35.14

Gene sequence:

>444_bases
ATGGAAAATGTAATGCAAGTTCGTGTAACCGGAATTTTAATTGAAGATGAAAAGGTATTGCTAGTAAAGCAAAAAGTGGC
TAATCGAAATTGGTCTTTACCTGGGGGAAGGGTAGAGAATAGTGAAACGTTAGAAGTAGCGATGATTCGAGAAATGAGAG
AAGAAACAGGGTTAGAAGTTAAAATTAAGAAGCTACTCTATGTTTGTGATAAACCAGATGTTAGGCCATCTTTATTACAT
ATTACGTTTCTGCTTGAAAGGATTGAGGGAGAAATTACGCTACCTTCTAATGAGTTTGATCATAATCCAATTCATGATGT
GCAAATGGTACCGATTAACGAATTAAGTCATTATGGTTTTTCGGAAACTTTTATAAAATTGGTAAATGAAGGGTTTGCAA
ATGCAGGGAGTTATCAAGGCTTGAAACAAAATGTAGGCCTGTAA

Upstream 100 bases:

>100_bases
GTAACAACTTCTTTCTTCCATAATTTTCTTTAATTATAAAACATACGTTCTTTTTGTGGAAGGATTAATTTGTAAATATA
ACGGGAAGAGGAGATTACAT

Downstream 100 bases:

>100_bases
ATATAGTTGAAGGATAGCCGTTAGCTATCCTTCATAAACATGTTTTACACTGCTGACTGTAAAGAAGAAACAAGTTGATT
TAAAAACTCATCCCCAGTCA

Product: mutt/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRVENSETLEVAMIREMREETGLEVKIKKLLYVCDKPDVRPSLLH
ITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSHYGFSETFIKLVNEGFANAGSYQGLKQNVGL

Sequences:

>Translated_147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRVENSETLEVAMIREMREETGLEVKIKKLLYVCDKPDVRPSLLH
ITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSHYGFSETFIKLVNEGFANAGSYQGLKQNVGL
>Mature_147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRVENSETLEVAMIREMREETGLEVKIKKLLYVCDKPDVRPSLLH
ITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSHYGFSETFIKLVNEGFANAGSYQGLKQNVGL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16733; Mature: 16733

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRVENSETLEVAMIREMREETGLEV
CCCCEEEEEEEEEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
KIKKLLYVCDKPDVRPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSHYGF
EEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEHHHHHCCCH
SETFIKLVNEGFANAGSYQGLKQNVGL
HHHHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRVENSETLEVAMIREMREETGLEV
CCCCEEEEEEEEEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
KIKKLLYVCDKPDVRPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSHYGF
EEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEHHHHHCCCH
SETFIKLVNEGFANAGSYQGLKQNVGL
HHHHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]