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The map label for this gene is fdhD [H]

Identifier: 222097024

GI number: 222097024

Start: 3307218

End: 3307889

Strand: Reverse

Name: fdhD [H]

Synonym: BCQ_3364

Alternate gene names: 222097024

Gene position: 3307889-3307218 (Counterclockwise)

Preceding gene: 222097025

Following gene: 222097023

Centisome position: 63.44

GC content: 34.08

Gene sequence:

>672_bases
ATGGTTAGTACTCCAGAATATATAGAAGATATGGTAATAGGCTTCTTAGCATCTGAAGGAATCATTCGGAAGTATGAAGA
TATTGATGACATATGGGTACAAGAGAAAGAAGGATTTGTACATGTCACGACGGCAAAAGTAAATCCGTATTACGAACAAA
TGCAAAATAAACGTTATATTACTTCATGCTGTGGTATGAGTAGACAAGGATTTGTTTTTGCAAATGATGCACTAAGCGCA
AAGAAAATGAATGGCGTCCATGTACAGGTTACTGCAGAAGACTGTTTTCGATTAATGAAAGAAATGCAGCAATCTGCGGA
GACATTTCGTCATACAGGGGGCGTTCATAATGCATCTTTGTGCAATGTGAATGGTATTATTTTAAGTCGAATGGATATCG
GAAGGCATAATGCGTTAGATAAAATTTACGGTTATTGTTTAAAAAATAATATTTCTATAAGAGATAAAATCATTGTTTTT
AGCGGTCGTATTTCTTCGGAAATATTATTGAAAGTTGCAAAAATTGGTTGTGAAATTATACTGTCAAAATCAGCTCCAAC
TGAGTTGGCTTTACAGCTAGCTGAAGAATTAGGTATTACTACGATAGGATTTATTCGGAATGAATCCTTAAATGTATATA
CGCATCCGGAGCGTGTTTTAAATATAAAATAA

Upstream 100 bases:

>100_bases
AATCTTTCGTTATGAACAAGAGGCGTTTAAACATATAGAGGACAGCATTGTAACAGAGTTTCCAGTCACGATTAAAATGA
ACGGACAGGAGTTTGTTACA

Downstream 100 bases:

>100_bases
GTAAAAGCGAGGCAATAAATATGAAATCTGTCACATTAGACAAACTACAACGTCCGTTAAAGGATTTACGTATTTCAGTT
ACTGATCGCTGTAATTTTCG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSA
KKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASLCNVNGIILSRMDIGRHNALDKIYGYCLKNNISIRDKIIVF
SGRISSEILLKVAKIGCEIILSKSAPTELALQLAEELGITTIGFIRNESLNVYTHPERVLNIK

Sequences:

>Translated_223_residues
MVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSA
KKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASLCNVNGIILSRMDIGRHNALDKIYGYCLKNNISIRDKIIVF
SGRISSEILLKVAKIGCEIILSKSAPTELALQLAEELGITTIGFIRNESLNVYTHPERVLNIK
>Mature_223_residues
MVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSA
KKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASLCNVNGIILSRMDIGRHNALDKIYGYCLKNNISIRDKIIVF
SGRISSEILLKVAKIGCEIILSKSAPTELALQLAEELGITTIGFIRNESLNVYTHPERVLNIK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=233, Percent_Identity=28.755364806867, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 25129; Mature: 25129

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYI
CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHH
TSCCGMSRQGFVFANDALSAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASL
HHHCCCCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CNVNGIILSRMDIGRHNALDKIYGYCLKNNISIRDKIIVFSGRISSEILLKVAKIGCEII
ECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCEEEE
LSKSAPTELALQLAEELGITTIGFIRNESLNVYTHPERVLNIK
EECCCCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCEEEECC
>Mature Secondary Structure
MVSTPEYIEDMVIGFLASEGIIRKYEDIDDIWVQEKEGFVHVTTAKVNPYYEQMQNKRYI
CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHH
TSCCGMSRQGFVFANDALSAKKMNGVHVQVTAEDCFRLMKEMQQSAETFRHTGGVHNASL
HHHCCCCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CNVNGIILSRMDIGRHNALDKIYGYCLKNNISIRDKIIVFSGRISSEILLKVAKIGCEII
ECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCEEEE
LSKSAPTELALQLAEELGITTIGFIRNESLNVYTHPERVLNIK
EECCCCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA