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The map label for this gene is paiB-2 [H]

Identifier: 222096968

GI number: 222096968

Start: 3251066

End: 3251665

Strand: Reverse

Name: paiB-2 [H]

Synonym: BCQ_3308

Alternate gene names: 222096968

Gene position: 3251665-3251066 (Counterclockwise)

Preceding gene: 222096969

Following gene: 222096961

Centisome position: 62.36

GC content: 36.5

Gene sequence:

>600_bases
ATGTATATACCAAAATATTTCGCAATACAAGATGAAGAAATGAAGTACGAAATAATGGAACAAAATAGCTTTGCAACGTT
ATTTTCTCAACATAATGGGGAACCATATGCAACGCATTTACCATTGTTATTAAATAGGGAGACCCTTACTTTACATGGTC
ACTTCGCACGGCCGAATGAACAGTGGAAAGATATTGGGAATCAGCAAGTACTAGCTATATTTCAAGGACCACATAGTTAC
ATCTCTCCGTCATGGTATGAAACAAACAATGCAGTACCAACATGGAATTACGTTGCAGTGCATGTATATGGTGAATTAAA
ATTTGTTGAAGATGAACAGGAATTAATAGATTCTCTTCAAGAGTTAGTACATAAGTATGAAGATCCAGAGAGCGCCTACT
CACTTAATGATGTAGACCCGAATTATATGGGAGGATTAAGTAAGGGAATAGTTGGGTTCAAAGTAAAGATAAATAAAATA
GAAGGAAAAGCGAAGTTAAGTCAAAATCATTCTGTGGAAAGAAGAAACTTAGTTGTGGAGAAGCTTGAGAAGGTTGGTAG
TGAGGGGAGTAGGTCGATTGCAGGGTTGATGAGAAAATAG

Upstream 100 bases:

>100_bases
AATAGAACGCTGCCATTATAAAACAAATACAAACTGGCCCTGTTGAATGCCACAAGACTTAAATATAATGAGAAATAAAA
GACCGGAAAAGAGGGAGTTT

Downstream 100 bases:

>100_bases
AGTTTACTTGAAAGGGAAACATTCTAAATAAGCGTATTTAAAAAGACCTTCTTAATGGAAGGTCTTTCGTTTTTAAAGTG
TTTTTTCAGTTGTTATTGGG

Product: protease synthase and sporulation negative regulatory protein pai 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYIPKYFAIQDEEMKYEIMEQNSFATLFSQHNGEPYATHLPLLLNRETLTLHGHFARPNEQWKDIGNQQVLAIFQGPHSY
ISPSWYETNNAVPTWNYVAVHVYGELKFVEDEQELIDSLQELVHKYEDPESAYSLNDVDPNYMGGLSKGIVGFKVKINKI
EGKAKLSQNHSVERRNLVVEKLEKVGSEGSRSIAGLMRK

Sequences:

>Translated_199_residues
MYIPKYFAIQDEEMKYEIMEQNSFATLFSQHNGEPYATHLPLLLNRETLTLHGHFARPNEQWKDIGNQQVLAIFQGPHSY
ISPSWYETNNAVPTWNYVAVHVYGELKFVEDEQELIDSLQELVHKYEDPESAYSLNDVDPNYMGGLSKGIVGFKVKINKI
EGKAKLSQNHSVERRNLVVEKLEKVGSEGSRSIAGLMRK
>Mature_199_residues
MYIPKYFAIQDEEMKYEIMEQNSFATLFSQHNGEPYATHLPLLLNRETLTLHGHFARPNEQWKDIGNQQVLAIFQGPHSY
ISPSWYETNNAVPTWNYVAVHVYGELKFVEDEQELIDSLQELVHKYEDPESAYSLNDVDPNYMGGLSKGIVGFKVKINKI
EGKAKLSQNHSVERRNLVVEKLEKVGSEGSRSIAGLMRK

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=155, Percent_Identity=30.9677419354839, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 22861; Mature: 22861

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPKYFAIQDEEMKYEIMEQNSFATLFSQHNGEPYATHLPLLLNRETLTLHGHFARPNE
CCCCCEEEECCCCCEEEECCCCCCEEHHHHCCCCCCEEECCEEECCCEEEEEEEECCCCH
QWKDIGNQQVLAIFQGPHSYISPSWYETNNAVPTWNYVAVHVYGELKFVEDEQELIDSLQ
HHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHH
ELVHKYEDPESAYSLNDVDPNYMGGLSKGIVGFKVKINKIEGKAKLSQNHSVERRNLVVE
HHHHHCCCCCCCCCCCCCCCHHHCCHHCCEEEEEEEEEEECCCCHHCCCCCHHHHHHHHH
KLEKVGSEGSRSIAGLMRK
HHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MYIPKYFAIQDEEMKYEIMEQNSFATLFSQHNGEPYATHLPLLLNRETLTLHGHFARPNE
CCCCCEEEECCCCCEEEECCCCCCEEHHHHCCCCCCEEECCEEECCCEEEEEEEECCCCH
QWKDIGNQQVLAIFQGPHSYISPSWYETNNAVPTWNYVAVHVYGELKFVEDEQELIDSLQ
HHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHH
ELVHKYEDPESAYSLNDVDPNYMGGLSKGIVGFKVKINKIEGKAKLSQNHSVERRNLVVE
HHHHHCCCCCCCCCCCCCCCHHHCCHHCCEEEEEEEEEEECCCCHHCCCCCHHHHHHHHH
KLEKVGSEGSRSIAGLMRK
HHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]