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The map label for this gene is ybxG [H]

Identifier: 222096921

GI number: 222096921

Start: 3205585

End: 3207003

Strand: Reverse

Name: ybxG [H]

Synonym: BCQ_3261

Alternate gene names: 222096921

Gene position: 3207003-3205585 (Counterclockwise)

Preceding gene: 222096922

Following gene: 222096919

Centisome position: 61.51

GC content: 38.34

Gene sequence:

>1419_bases
ATGAATCATCTAAGAGGGGGAAGTGAAGTGGCAAACAAAGAATTGAAAAGAGGTTTAGAAGCACGTCATATTCAAATGAT
TGCTTTAGGCGGAACAATTGGTGTTGGTTTGTTTATGGGTTCAGCCAGCACGATTAAATGGACAGGTCCGTCAGTTATGC
TTGCGTATGCAATTGCAGGTATTTTTATCTTCTTCATCATGCGTGCCATGGGAGAAATGTTGTATATGGAGCCAAGTACA
GGATCATTTGCAACGTTCGGTCATAAGTATATTCACCCGTTAGCTGGTTACATGACAGCGTGGAGTAACTGGTTCCAGTG
GGTTATCGTTGGGATGTCAGAGATTATCGCGGTGGGGGCGTATATGCAATATTGGTTCCCGGATTTACCAGCTTGGATAC
CAGGTGTAATCGCAATGGTTATTCTTGGCGCAGCTAACTTAATTTCTGTTAAGTCATTTGGTGAATTTGAATTTTGGTTT
GCGATGATTAAAATCGTTACAATTCTATTAATGATTATTGCGGGATTTGGACTTATTTTCTTTGGAATTGGTAACGGTGG
AGAAGCGATTGGCATATCGAATCTTTGGTCAAATGGTGGTTTCTTTACAGGTGGTTTTTCTGGATTCTTCTTTGCATTAT
CACTTGTAGTAGGAGCGTATCAAGGTGTAGAATTAATCGGTATTACTGCTGGTGAAGCGAAGGATCCGAAGAAGACACTT
ACAAGAGCGATTCAAAGTACAATTTGGCGTATTTTAATTTTCTACATCGGTGCGATTTTCGTTATTGTAACTGTGTATCC
GTGGGATCAATTAAGTACAATTGGAAGTCCATTCGTAGCAACTTTTGCGAAAGTTGGTATTACGGCTGCTGCGGGATTAA
TTAACTTTGTTGTTATTACAGCAGCAATGTCTGGTTGTAATAGTGGTATTTATAGTGCTGGTCGTATGCTATATACGTTA
GGTGTACATGGACAAGCACCGAAATATTTCACGAAACTTTCTGGAAATGGTGTACCTTTATTCGGTACAGTTGGCGTAAT
TATCGGTTTAGCGGTCGGTGTAGTTCTAAGTTATATTGCACCAAAAAACTTATTCGTATATGTATATAGTGCGAGTGTAC
TTCCTGGTATGGTACCATGGTTTGTCATTTTAATTAGCCAAATTAATTTTAGAAAAGAAAAGGGAGCAGAGATGAAAGAT
CATCCGTTCAAAATGCCGTTTGCTCCTGTTACAAACTATTTAACAATTGCCTTTTTAATTATGGTATTAATCGGAATGTG
GTTTAACGATGATACGCGCATTTCATTAGTTGTAGGTATTATTTTCTTAGCTATCGTTACAATTAGTTTCTATGCTTTCG
GAATAGGAAAGCGAACTCCGTTAGACGTTCAAAATGATCAAGAGATTTCAAGTAAATAA

Upstream 100 bases:

>100_bases
ATTTTAGGATAGCTTTAAAGCTAGTGTAAAATGACGTTTGCTTCATCATTTTCAGGGCCGAAAGGAATTAGGGGAAAGCA
TCTTGTTTTAAAATGCGGCT

Downstream 100 bases:

>100_bases
AGATAGTAAAAAGTCCGATTTCTCATTTGGAAATCGGACTTTTTGTTATTAAAACTTTTCTAAAACGATCTTCCCAATTG
TACTTCCGCTTTCAAGTAGT

Product: ybdp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVHGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRTPLDVQNDQEISSK

Sequences:

>Translated_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVHGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRTPLDVQNDQEISSK
>Mature_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVHGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRTPLDVQNDQEISSK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=450, Percent_Identity=62.2222222222222, Blast_Score=561, Evalue=1e-161,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=43.5164835164835, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1786602, Length=441, Percent_Identity=47.8458049886621, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1790653, Length=432, Percent_Identity=44.212962962963, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786302, Length=438, Percent_Identity=39.9543378995434, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI87081915, Length=470, Percent_Identity=36.1702127659575, Blast_Score=293, Evalue=1e-80,
Organism=Escherichia coli, GI87081708, Length=463, Percent_Identity=34.9892008639309, Blast_Score=289, Evalue=2e-79,
Organism=Escherichia coli, GI1788480, Length=437, Percent_Identity=36.6132723112128, Blast_Score=281, Evalue=9e-77,
Organism=Escherichia coli, GI1789017, Length=469, Percent_Identity=33.4754797441365, Blast_Score=264, Evalue=9e-72,
Organism=Escherichia coli, GI87082023, Length=472, Percent_Identity=25.8474576271186, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081869, Length=454, Percent_Identity=22.2466960352423, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324061, Length=505, Percent_Identity=32.0792079207921, Blast_Score=226, Evalue=7e-60,
Organism=Saccharomyces cerevisiae, GI6320772, Length=445, Percent_Identity=33.7078651685393, Blast_Score=212, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6324990, Length=504, Percent_Identity=30.952380952381, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6324924, Length=422, Percent_Identity=31.2796208530806, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=31.5192743764172, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322892, Length=440, Percent_Identity=30.2272727272727, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6324553, Length=411, Percent_Identity=31.6301703163017, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6322967, Length=411, Percent_Identity=28.7104622871046, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321629, Length=426, Percent_Identity=26.5258215962441, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321053, Length=431, Percent_Identity=28.7703016241299, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6319824, Length=398, Percent_Identity=29.6482412060301, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6319608, Length=421, Percent_Identity=28.2660332541568, Blast_Score=153, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=411, Percent_Identity=28.4671532846715, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=416, Percent_Identity=26.6826923076923, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6320717, Length=400, Percent_Identity=26.75, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6319542, Length=408, Percent_Identity=26.9607843137255, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6324981, Length=414, Percent_Identity=28.9855072463768, Blast_Score=137, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6320364, Length=499, Percent_Identity=23.2464929859719, Blast_Score=90, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51249; Mature: 51249

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHHEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVHGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHHCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRTPLDVQNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHHEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVHGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHHCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRTPLDVQNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]