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The map label for this gene is ycaK [C]

Identifier: 222096768

GI number: 222096768

Start: 3065862

End: 3066437

Strand: Reverse

Name: ycaK [C]

Synonym: BCQ_3108

Alternate gene names: 222096768

Gene position: 3066437-3065862 (Counterclockwise)

Preceding gene: 222096769

Following gene: 222096767

Centisome position: 58.81

GC content: 37.85

Gene sequence:

>576_bases
GTGAATGTACTTATTGTATACGCTCATCCTAGTCCTTCAAGTTTTAACGCGGCAATTTTAAATCATGTGCAAAAAGGACT
ACAGGAAACAAATCATTCAGTTACCGTACTTGATTTATATAAGGAGCAATTTGATCCAGTCCTTGTATTTAATGAAGAGA
AGAAAAGACGTGACTTAGTAAATGAAGAAGAAACAGCTCGGTACAGAACATTAGTAGAAGAAGCGGATATGTTTCTATTC
ATCTATCCGATATGGTGGTGGGGGATGCCAGCTATTTTAAAAGGATTTATTGATCGTATTTTCGTTGCCGGATTTGCTTA
TAAATATGAAGGTGCTCTGCCGAAAGGGTTATTGAAAGGGAAGAAGGCGTGGGTGATTAATACGCTAGATTCACCGTTAT
GGTACGTCGCACTATTATATCGATCAGCAGATTGGATTATAATGAAGAGAGGTGTCTTACGTTTTTGCGGCATTCGCGAT
ATAAAACGGTCAGTTTTTCAATCTGTGAAAACGAGTAAACGAGAGAAGCGGGAAAAGTGGTTATTACAAATAGAAGAAAA
GGCTCGTACATTATGA

Upstream 100 bases:

>100_bases
CAGTATTAAACCGGTTGTTACAAAGTTCAAAAAACGTGCAAATTGTGGAGAAGATGTTAAAGAAGGGGAAACTTTAACTT
ATAAAGGGAGTTGTTTTGTA

Downstream 100 bases:

>100_bases
ATGAAATGGAACGTATTATAAACTGTTGTGGGTATGATAACGAACTTTTTCGAACGTATATTACATGTTTGCTTCAATTG
AAAAAATGTAGTGAAATATT

Product: nad(p)h dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMFLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Sequences:

>Translated_191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMFLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL
>Mature_191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMFLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=212, Percent_Identity=28.7735849056604, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI4505415, Length=214, Percent_Identity=28.0373831775701, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1787129, Length=114, Percent_Identity=34.2105263157895, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22459; Mature: 22459

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCHHHHHCC
NEEETARYRTLVEEADMFLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CCHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWVINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCEEEEECCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC
>Mature Secondary Structure
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCHHHHHCC
NEEETARYRTLVEEADMFLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CCHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWVINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCEEEEECCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]