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The map label for this gene is gerKA [H]

Identifier: 222096644

GI number: 222096644

Start: 2926012

End: 2927601

Strand: Reverse

Name: gerKA [H]

Synonym: BCQ_2984

Alternate gene names: 222096644

Gene position: 2927601-2926012 (Counterclockwise)

Preceding gene: 222096646

Following gene: 222096643

Centisome position: 56.15

GC content: 40.82

Gene sequence:

>1590_bases
ATGAAAAAACTTAGTAGAAATCGTTTGAGAAAAGATATTCAGGAACTTGAGAGTGCAAGTATGCAGATCCAACATGATCA
AGAGTGTGAACTCAAGCAGAGTGTATGTGCGAATGAAGAAGTTTTGAGACAAGTTTTTGAAAATTGTTCCGATATTGTAT
TTCGTCCACTTCTCATAAATAGTCAAACTGAAATTCTTTTTATTTATATAGATGGATTAGTTGACACTAAGATTGTGGAA
CAAGTTGTTTTCAAACCAATGATGTTTGAAGGTTTGCCTAGTGGAGTAAAGAGTGAGGATTCGGTAGGAGAAATTATACA
AAAACAGCTTATTGCGGTTTCTCAAGTAAAGACGATTTCAAAAGTTCATGAGGTTATAGAAGCGATATTGAAAGCGAATA
TCGTCATTTTAACAGAAGGAGAGAGTCAAGCTCTAGTCGCTGATTTAAAAGGGTTTGAAAAACGAGGTATTGAAGAACCG
GCTGCCGAGATTTCTGTTCGTGGCCCTCGGGACGGATTTACCGAAACGTTAAGGGTGAATACGAGCCTAATTCGCCGAAG
GATTCGGAGTCAAAGACTAAAAATGGAACCTTATTCGATTGGGGAATTATCACAGACAGATGTGGTAATTGCCTATATTG
AGGGCATTGCACCCGATTCGGTTTTGGATGAAGTTCGCCAAAGGGTAAAGCGAATTCAAATTGATGGGGTGTTGGAGTCA
GCTTTTATTGAAGAGTTTATCGAGGATCAACCCTTTTCTCCCTTTCCGCAAATTCAAAATACCGAGCGACCAGACGCGGT
TTGTGCAAGTTTATTAGAAGGGAAAGTCGCCATTTTAGTCGATAATACACCTTTCGTTTTAATCGTTCCGATGACATTTT
GGACGGGTTTGCAAGCAGCGGAGGATTATTATGAGCGCTCCATCTACACGACTTTTGTTCGATGGATACGTTTAATATTA
ATTAATATTTCATTATTTCTTCCGTCTCTCTATGTTGCTATTACAACTTTTCATCCGAAATTAATTCCGACAAATTTGCT
TATTAGTATTGCAGCTGCGCGAGAAGGTATTCCTTTTCCTGCTGTTATAGAAGCACTAATGATGGAATTTTTATTTGAAG
GTTTGAGGGAAGCGGGCGTTCGGTTACCAAAACCCGTTGGATCAGCAGTTAGCATTGTGGGGGCACTTGTTATCGGGCAA
GCTGCTGTGCAAGCAGGTATTATTTCCGCACCTTTAGTTATTGTTGTGGCGACAACCGGTATTGCGTCATTTGCGTTCCC
GCGCTACAACTTAGGAACAGCTTACCGGATGTTACGCTTTCCTATGCTGTTATTGGCAGGAATGCTTGGGCTATACGGTA
TAGCAATAAGTACCCTTGCGATTTTGATTCATTTAACTAACATTCGTTCTTTTGGCATTCCGTATTTAAGTCCAGTTGCG
CCTCAGACTCCGCGTGATTTAAAGGATGTTTTTCTCCGAACGCCTCGTTGGAATATGACACACCGCCCAATAATGGTATC
TGGTGAAGAGAAAGTTCGTTTTCCAGATGGACAAAAGCCAGATGAGAAACGGGGAGGGGGAACAGAATGA

Upstream 100 bases:

>100_bases
CCATGTGGTGGAACGGTTTCTAAAGCTTTTCTGTCAAGAAATCACTAACACTAAAGTTCAAGTATAAAAACATAAACCAT
TCGATAAATGGGGTAGTATG

Downstream 100 bases:

>100_bases
GTCTGCACAAGGCGCTCTCTATGATACTGGTCGTTTCATTATGCTTCTTGACGGGATGTTGGGATCGTACGGAGCTAAAT
GATCTGGCAATTGAATTAGG

Product: germination response to the combination of glucose, fructose, L-asparagine, and kcl

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKKLSRNRLRKDIQELESASMQIQHDQECELKQSVCANEEVLRQVFENCSDIVFRPLLINSQTEILFIYIDGLVDTKIVE
QVVFKPMMFEGLPSGVKSEDSVGEIIQKQLIAVSQVKTISKVHEVIEAILKANIVILTEGESQALVADLKGFEKRGIEEP
AAEISVRGPRDGFTETLRVNTSLIRRRIRSQRLKMEPYSIGELSQTDVVIAYIEGIAPDSVLDEVRQRVKRIQIDGVLES
AFIEEFIEDQPFSPFPQIQNTERPDAVCASLLEGKVAILVDNTPFVLIVPMTFWTGLQAAEDYYERSIYTTFVRWIRLIL
INISLFLPSLYVAITTFHPKLIPTNLLISIAAAREGIPFPAVIEALMMEFLFEGLREAGVRLPKPVGSAVSIVGALVIGQ
AAVQAGIISAPLVIVVATTGIASFAFPRYNLGTAYRMLRFPMLLLAGMLGLYGIAISTLAILIHLTNIRSFGIPYLSPVA
PQTPRDLKDVFLRTPRWNMTHRPIMVSGEEKVRFPDGQKPDEKRGGGTE

Sequences:

>Translated_529_residues
MKKLSRNRLRKDIQELESASMQIQHDQECELKQSVCANEEVLRQVFENCSDIVFRPLLINSQTEILFIYIDGLVDTKIVE
QVVFKPMMFEGLPSGVKSEDSVGEIIQKQLIAVSQVKTISKVHEVIEAILKANIVILTEGESQALVADLKGFEKRGIEEP
AAEISVRGPRDGFTETLRVNTSLIRRRIRSQRLKMEPYSIGELSQTDVVIAYIEGIAPDSVLDEVRQRVKRIQIDGVLES
AFIEEFIEDQPFSPFPQIQNTERPDAVCASLLEGKVAILVDNTPFVLIVPMTFWTGLQAAEDYYERSIYTTFVRWIRLIL
INISLFLPSLYVAITTFHPKLIPTNLLISIAAAREGIPFPAVIEALMMEFLFEGLREAGVRLPKPVGSAVSIVGALVIGQ
AAVQAGIISAPLVIVVATTGIASFAFPRYNLGTAYRMLRFPMLLLAGMLGLYGIAISTLAILIHLTNIRSFGIPYLSPVA
PQTPRDLKDVFLRTPRWNMTHRPIMVSGEEKVRFPDGQKPDEKRGGGTE
>Mature_529_residues
MKKLSRNRLRKDIQELESASMQIQHDQECELKQSVCANEEVLRQVFENCSDIVFRPLLINSQTEILFIYIDGLVDTKIVE
QVVFKPMMFEGLPSGVKSEDSVGEIIQKQLIAVSQVKTISKVHEVIEAILKANIVILTEGESQALVADLKGFEKRGIEEP
AAEISVRGPRDGFTETLRVNTSLIRRRIRSQRLKMEPYSIGELSQTDVVIAYIEGIAPDSVLDEVRQRVKRIQIDGVLES
AFIEEFIEDQPFSPFPQIQNTERPDAVCASLLEGKVAILVDNTPFVLIVPMTFWTGLQAAEDYYERSIYTTFVRWIRLIL
INISLFLPSLYVAITTFHPKLIPTNLLISIAAAREGIPFPAVIEALMMEFLFEGLREAGVRLPKPVGSAVSIVGALVIGQ
AAVQAGIISAPLVIVVATTGIASFAFPRYNLGTAYRMLRFPMLLLAGMLGLYGIAISTLAILIHLTNIRSFGIPYLSPVA
PQTPRDLKDVFLRTPRWNMTHRPIMVSGEEKVRFPDGQKPDEKRGGGTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 58991; Mature: 58991

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSRNRLRKDIQELESASMQIQHDQECELKQSVCANEEVLRQVFENCSDIVFRPLLIN
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEC
SQTEILFIYIDGLVDTKIVEQVVFKPMMFEGLPSGVKSEDSVGEIIQKQLIAVSQVKTIS
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVHEVIEAILKANIVILTEGESQALVADLKGFEKRGIEEPAAEISVRGPRDGFTETLRVN
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHH
TSLIRRRIRSQRLKMEPYSIGELSQTDVVIAYIEGIAPDSVLDEVRQRVKRIQIDGVLES
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AFIEEFIEDQPFSPFPQIQNTERPDAVCASLLEGKVAILVDNTPFVLIVPMTFWTGLQAA
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHH
EDYYERSIYTTFVRWIRLILINISLFLPSLYVAITTFHPKLIPTNLLISIAAAREGIPFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH
AVIEALMMEFLFEGLREAGVRLPKPVGSAVSIVGALVIGQAAVQAGIISAPLVIVVATTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH
IASFAFPRYNLGTAYRMLRFPMLLLAGMLGLYGIAISTLAILIHLTNIRSFGIPYLSPVA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PQTPRDLKDVFLRTPRWNMTHRPIMVSGEEKVRFPDGQKPDEKRGGGTE
CCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLSRNRLRKDIQELESASMQIQHDQECELKQSVCANEEVLRQVFENCSDIVFRPLLIN
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEC
SQTEILFIYIDGLVDTKIVEQVVFKPMMFEGLPSGVKSEDSVGEIIQKQLIAVSQVKTIS
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVHEVIEAILKANIVILTEGESQALVADLKGFEKRGIEEPAAEISVRGPRDGFTETLRVN
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHH
TSLIRRRIRSQRLKMEPYSIGELSQTDVVIAYIEGIAPDSVLDEVRQRVKRIQIDGVLES
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AFIEEFIEDQPFSPFPQIQNTERPDAVCASLLEGKVAILVDNTPFVLIVPMTFWTGLQAA
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHH
EDYYERSIYTTFVRWIRLILINISLFLPSLYVAITTFHPKLIPTNLLISIAAAREGIPFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH
AVIEALMMEFLFEGLREAGVRLPKPVGSAVSIVGALVIGQAAVQAGIISAPLVIVVATTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH
IASFAFPRYNLGTAYRMLRFPMLLLAGMLGLYGIAISTLAILIHLTNIRSFGIPYLSPVA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PQTPRDLKDVFLRTPRWNMTHRPIMVSGEEKVRFPDGQKPDEKRGGGTE
CCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]