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The map label for this gene is yndE [H]

Identifier: 222096642

GI number: 222096642

Start: 2923712

End: 2924800

Strand: Reverse

Name: yndE [H]

Synonym: BCQ_2982

Alternate gene names: 222096642

Gene position: 2924800-2923712 (Counterclockwise)

Preceding gene: 222096643

Following gene: 222096641

Centisome position: 56.09

GC content: 37.83

Gene sequence:

>1089_bases
ATGAAAATCTCTGGCAGGCAAATTTTTTGGATGATGTTCACATTTGAAGTGGGACAATCACTCCTTCTAGTTATTCCAGC
GACGATTCGCACTGCCAAACAAGATGCGTGGATTTCGATCTTGATTGCAGGGGGGATAGGGGTTGCTCTTACTTTTTTGG
CAACTACACTTGGTTCGCTCTATCCGAAACAAACGTTAATTGAATTTAGTCAAACCATTCTTGGTAAATGGCTAGGAAAG
CTGCTGCTGATTCCTTACTTCTTTGGATGGTACATGATAATTTGGATAACCGTCCGTGAATTTGGTGAGTTCATTATTAT
CGCTTTGTTTCATAATACACCTTTGTGGGTTATTGTCTTGACTGCGATGTTATTGCTCATTTTTATTATTTACCAAGGCG
GGGTGGAGGGGGTTGGACGTTTAAGTGAAATTATAGGGCCAATTGTACTTTTAATGATAACGTTTGTAATCATTTTGAAT
ATTGGCAATATGAATTGGGATTATATGCGGCCTATTTATCATGATTCTGGATGGCTTCCGATACTTAAAGGCTCCTATAC
TCCTGTAGCTGCATTTTTCGGGGAGGCTGTCATGATGATGATGTTCGTTTTCTTTATGGACAAACCAGAACAAGCGTCAT
CGCGGGCGATGTGGGGAGTAGGACTGGCCGTTTTCATGGTAACGATCGGAACATTAGCGGTCATTTTAACATTCGGTCCG
AATCTATCTTCAAGTTTTTTGTATCCGGTTTACGATTTGAGCCGGTACATATCCGTCATGGAGTTCATTCAAAATGTAGA
TATTTTGATAGTAATTATTTGGTTTTTTAGTATTTTTGTTAAACTGGCGTTATACATGTTTATCGCTTGTTATGGAACAG
CACAAATATTTCATTTAAAGGATTGGCGAAAAGTAGCTTTAGTTCTTGCTCCTATTTCGTTCATCATAGCTGTATCAGTT
AAAAATATCCAAACATTTACCCATTATTACTACATATTTTTTGTAATTCCAATTGCATTTCCCGTCTATGAGCTAGGAAT
TCCTTTACTATTATTGGTGGTTGGTAAAATTCGAAGGAAATATGCATAA

Upstream 100 bases:

>100_bases
AAAGCTTACTATTCGGAGAGTAGGACTGACTGGACCACCGTTGCAGTTAAAGAAAAACGAAATGAAAAAATAAGGAGGAA
TATAGAGTGTGAGAAATTCA

Downstream 100 bases:

>100_bases
ACCTAATCGGATAATGTGTTCGAATGAAGGTATGCATAGATTTTTGACGAAAATAAAACGAAATAGCCTACTCATCAGAG
TAGGCTATTTCGTTTATGTA

Product: ynde

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKISGRQIFWMMFTFEVGQSLLLVIPATIRTAKQDAWISILIAGGIGVALTFLATTLGSLYPKQTLIEFSQTILGKWLGK
LLLIPYFFGWYMIIWITVREFGEFIIIALFHNTPLWVIVLTAMLLLIFIIYQGGVEGVGRLSEIIGPIVLLMITFVIILN
IGNMNWDYMRPIYHDSGWLPILKGSYTPVAAFFGEAVMMMMFVFFMDKPEQASSRAMWGVGLAVFMVTIGTLAVILTFGP
NLSSSFLYPVYDLSRYISVMEFIQNVDILIVIIWFFSIFVKLALYMFIACYGTAQIFHLKDWRKVALVLAPISFIIAVSV
KNIQTFTHYYYIFFVIPIAFPVYELGIPLLLLVVGKIRRKYA

Sequences:

>Translated_362_residues
MKISGRQIFWMMFTFEVGQSLLLVIPATIRTAKQDAWISILIAGGIGVALTFLATTLGSLYPKQTLIEFSQTILGKWLGK
LLLIPYFFGWYMIIWITVREFGEFIIIALFHNTPLWVIVLTAMLLLIFIIYQGGVEGVGRLSEIIGPIVLLMITFVIILN
IGNMNWDYMRPIYHDSGWLPILKGSYTPVAAFFGEAVMMMMFVFFMDKPEQASSRAMWGVGLAVFMVTIGTLAVILTFGP
NLSSSFLYPVYDLSRYISVMEFIQNVDILIVIIWFFSIFVKLALYMFIACYGTAQIFHLKDWRKVALVLAPISFIIAVSV
KNIQTFTHYYYIFFVIPIAFPVYELGIPLLLLVVGKIRRKYA
>Mature_362_residues
MKISGRQIFWMMFTFEVGQSLLLVIPATIRTAKQDAWISILIAGGIGVALTFLATTLGSLYPKQTLIEFSQTILGKWLGK
LLLIPYFFGWYMIIWITVREFGEFIIIALFHNTPLWVIVLTAMLLLIFIIYQGGVEGVGRLSEIIGPIVLLMITFVIILN
IGNMNWDYMRPIYHDSGWLPILKGSYTPVAAFFGEAVMMMMFVFFMDKPEQASSRAMWGVGLAVFMVTIGTLAVILTFGP
NLSSSFLYPVYDLSRYISVMEFIQNVDILIVIIWFFSIFVKLALYMFIACYGTAQIFHLKDWRKVALVLAPISFIIAVSV
KNIQTFTHYYYIFFVIPIAFPVYELGIPLLLLVVGKIRRKYA

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41252; Mature: 41252

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISGRQIFWMMFTFEVGQSLLLVIPATIRTAKQDAWISILIAGGIGVALTFLATTLGSL
CCCCCCEEEEHHHHHHHCCCEEEEECHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH
YPKQTLIEFSQTILGKWLGKLLLIPYFFGWYMIIWITVREFGEFIIIALFHNTPLWVIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH
TAMLLLIFIIYQGGVEGVGRLSEIIGPIVLLMITFVIILNIGNMNWDYMRPIYHDSGWLP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCE
ILKGSYTPVAAFFGEAVMMMMFVFFMDKPEQASSRAMWGVGLAVFMVTIGTLAVILTFGP
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLSSSFLYPVYDLSRYISVMEFIQNVDILIVIIWFFSIFVKLALYMFIACYGTAQIFHLK
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEH
DWRKVALVLAPISFIIAVSVKNIQTFTHYYYIFFVIPIAFPVYELGIPLLLLVVGKIRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YA
CC
>Mature Secondary Structure
MKISGRQIFWMMFTFEVGQSLLLVIPATIRTAKQDAWISILIAGGIGVALTFLATTLGSL
CCCCCCEEEEHHHHHHHCCCEEEEECHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH
YPKQTLIEFSQTILGKWLGKLLLIPYFFGWYMIIWITVREFGEFIIIALFHNTPLWVIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH
TAMLLLIFIIYQGGVEGVGRLSEIIGPIVLLMITFVIILNIGNMNWDYMRPIYHDSGWLP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCE
ILKGSYTPVAAFFGEAVMMMMFVFFMDKPEQASSRAMWGVGLAVFMVTIGTLAVILTFGP
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLSSSFLYPVYDLSRYISVMEFIQNVDILIVIIWFFSIFVKLALYMFIACYGTAQIFHLK
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEH
DWRKVALVLAPISFIIAVSVKNIQTFTHYYYIFFVIPIAFPVYELGIPLLLLVVGKIRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]