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The map label for this gene is ybcD

Identifier: 222096639

GI number: 222096639

Start: 2918198

End: 2920822

Strand: Reverse

Name: ybcD

Synonym: BCQ_2979

Alternate gene names: NA

Gene position: 2920822-2918198 (Counterclockwise)

Preceding gene: 222096640

Following gene: 222096638

Centisome position: 56.02

GC content: 38.55

Gene sequence:

>2625_bases
ATGAGCATACAGTCAATCGTAACGAAAGAAACTTTAAAAAAGAAAGATACAAACATTGAAATACAAGAAAAGAATATGAA
TGATTTAGTTGAATCTGCTAGCCGAGTGATTGCACCACTTTGGCCTATCTCTACATTCGCAGCTCATCACCCTTGGATGG
GGCTTGAAAAGCAATCATTTGAACAAGTCGCAAATTGGTTAAAAGAAGCTCGTAATGTAGATATTTATCCTAGTGCCTCC
ATGATTCATTCGGCAAAGGCGAAAGGTGAGATTGAGGAATCATTTTTACAAATAGGCTTGTCTCGTTGGCTTGATTCACA
ATCTTTTCATATTCCGCGAGAGACAGCAGAGCGTTTTTGCCAAGAAGCTTTAAAGTTAGAGAGATTACCTTCTAGTTTAT
TATCATCGCCAGAATTAAATAAATTAGCAGAAGAAATAAGTTATATAAATACAGGGAGTATGGAAGACTCTTCTATGCAA
CCAATCAGTTCACTTATAGAGAATCAAAAGGGTGACAACCTATCAGATGTTCTTAATTACCATATTATTAAATGGTGTAA
ATTATATCTTGATGACTCCGGATCAAGTTGGACGATGCCAAACCGAGAGAAAGGTTTGTATCGTGCATGGCATCACCTTA
TTACATTTGATCCAGCGCTCAGTAAAAATGAGCGTAAAGTTTTAAAAGATTGGCCACAGGATGCTCAGGGAGCTTTAACA
AAAGCATTATCTGAACTAGGAATTCCTGAATCTAACAGGCAAGCTTACCTTGAAGGGCACTTACTTTCTTTGCCTGGGTG
GGCAGGAATGATACGATGGCGCTCCCAACAATCAATTAAGGAACAGGCACTCGTTATAGAATATTTAGCAGTTCGAATTT
CAATGGAGCTGGCTATTGTAAAACCTTATTTACCTTTAAAAAATCAAAAGGCTGAGAAAAAAGTTTCGATTGTCCCACTT
ATAGCTTCTTGGATCTATTGGGGGGATATTTCAACACGGGAATGGTTACAAATGTCTGCCACTGAACAAAGCGAATTATT
AGCATTTGCTTATCGTTTTGATGAAAATACTCGTAAGAAACTTTGGCTGGAAGCTTGGGAACAGACGCATGCAGAGCAAT
TAAAGAAGAAGATTTCTTCTAAACAACGTGCAACGAATGATAAAAAGCGTGTAGTAGCTCAATTAGCATTTTGTATTGAT
GTCCGTTCAGAACCGTTTCGTCGCCACCTTGAAAAATTAGGTCCGTTTGAAACGTTTGGAATAGCTGGCTTCTTTGGGTT
ACCAATTGCGACTACTGAACTAGGCAGTAATAACAGCCATCCTTCTTTGCCAGTTATATTAAAACCGAAACATCAAATAA
AAGAACTCGCGGATGAAAATGAATATAAATCTTATGAGCAACGTAAGAAGATAGACAGCTCAGTAAGTTATACGTTTAAG
ACGATGAAAAAAAATGTATTGACAAGTATGCTATTACCTGAGGTGAGTGGCCCTTTACTTGGTTTACAAATGATAACAAG
GAGTTTTGTGCCAAGAAGAGTAGGTGGCTTCATTCGTAACCTTCGTAAAAATATGTTACAAAAACCTAATACAACATTCT
CACTTAATCATGTCCATGATACAAAATGTGAGATACCTATCGGTTTTACGAAAGAAGAAAAAGTGAACTATGTGCGTCAA
GCTTTAAAAATGGTGGGACTGACAGAAAAATTTGCTCCTTTAGTTGTAATGTGCGGACACAGTAGTCAAAGTACGAACAA
TCCTTATGCTGCAGCGCTTGAGTGTGGTGCGTGTGGCGGAGCAGCAGGAGGGTTCAATGCAAGAGTTTTTGCTACATTAT
GTAATCTTCCAGAAGTAAGAGAGGCATTGTCTGCTGAAGGCATTAAAATTCCTGAGGATACCATTTTTGCAGCAGCTGAA
CATAAAACAACAGTGGACGAATTGGAATGGATTTACGTTCCAGAACTTTCGGAAGCTGCGCAAGAAGCATTTGATAATAT
TGAGTCGGTTATGCCAAATGTGAGCCAACATGCAAATAGAGAGCGTTTAACACAATTGCCTAATTTTAAAATGAAAATAA
AAAATCCGAGTAAAGAGGCACATCGATTTGCAGAAGATTGGAGTGAAATACGTCCGGAATGGGGATTAGCTCGTAATGCA
TCTTTTATTATCGGGCAGCGTGAATTGACTCAGGATTGTGACTTAGAAGGTAGGGCTTTCCTTCATAATTATGATTGGAA
ACAGGATGAAAATGGCGATATATTAGCTAGCATCATAGCGGGACCAGGAACAGTAGCGCAGTGGATCAATCTACAATATT
ACGCTTCAACTGTAGCTCCTCATTATTATGGTAGTGGAAACAAAACAACACAAACCGTTACGGCAGGTCTCGGTGTTATG
CAAGGAAATGCAAGTGATTTGTTATCAGGCTTACCTTGGCAATCCGTTATGCAGTCAGATAGTGAAACGTATCACTCACC
ACTTCGTTTACTCATTGTAATTCAAGCGCCTACTAAATATATAGAACGTTTGCTAAATAATGATTTCACATTTCGAGAAA
AAGTTCAAAATGGATGGGTCAGACTTGCAAGTGTTGATTCAGAGGGACGCTGGAAAAACTGGTAA

Upstream 100 bases:

>100_bases
TTTATCTTTGGTTAGTTCGAGTAGGTGAGGCGAGACGAAAGTCAGTAGAAAGTCACCCAAGCTATCTGAAACATTATGTA
TCAAAGGGAGGTAATTCGTG

Downstream 100 bases:

>100_bases
AAATCATGTAATGAATCATTGTTACTAGCTTAAAAGTTTCATAAATACAATCATGAAGAAGGAGTGCTATATATGAGTTC
AAAGCATAAAAAGGTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 874; Mature: 873

Protein sequence:

>874_residues
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVESASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIGLSRWLDSQSFHIPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYINTGSMEDSSMQ
PISSLIENQKGDNLSDVLNYHIIKWCKLYLDDSGSSWTMPNREKGLYRAWHHLITFDPALSKNERKVLKDWPQDAQGALT
KALSELGIPESNRQAYLEGHLLSLPGWAGMIRWRSQQSIKEQALVIEYLAVRISMELAIVKPYLPLKNQKAEKKVSIVPL
IASWIYWGDISTREWLQMSATEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLKKKISSKQRATNDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELADENEYKSYEQRKKIDSSVSYTFK
TMKKNVLTSMLLPEVSGPLLGLQMITRSFVPRRVGGFIRNLRKNMLQKPNTTFSLNHVHDTKCEIPIGFTKEEKVNYVRQ
ALKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPEDTIFAAAE
HKTTVDELEWIYVPELSEAAQEAFDNIESVMPNVSQHANRERLTQLPNFKMKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTQDCDLEGRAFLHNYDWKQDENGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDSEGRWKNW

Sequences:

>Translated_874_residues
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVESASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIGLSRWLDSQSFHIPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYINTGSMEDSSMQ
PISSLIENQKGDNLSDVLNYHIIKWCKLYLDDSGSSWTMPNREKGLYRAWHHLITFDPALSKNERKVLKDWPQDAQGALT
KALSELGIPESNRQAYLEGHLLSLPGWAGMIRWRSQQSIKEQALVIEYLAVRISMELAIVKPYLPLKNQKAEKKVSIVPL
IASWIYWGDISTREWLQMSATEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLKKKISSKQRATNDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELADENEYKSYEQRKKIDSSVSYTFK
TMKKNVLTSMLLPEVSGPLLGLQMITRSFVPRRVGGFIRNLRKNMLQKPNTTFSLNHVHDTKCEIPIGFTKEEKVNYVRQ
ALKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPEDTIFAAAE
HKTTVDELEWIYVPELSEAAQEAFDNIESVMPNVSQHANRERLTQLPNFKMKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTQDCDLEGRAFLHNYDWKQDENGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDSEGRWKNW
>Mature_873_residues
SIQSIVTKETLKKKDTNIEIQEKNMNDLVESASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSASM
IHSAKAKGEIEESFLQIGLSRWLDSQSFHIPRETAERFCQEALKLERLPSSLLSSPELNKLAEEISYINTGSMEDSSMQP
ISSLIENQKGDNLSDVLNYHIIKWCKLYLDDSGSSWTMPNREKGLYRAWHHLITFDPALSKNERKVLKDWPQDAQGALTK
ALSELGIPESNRQAYLEGHLLSLPGWAGMIRWRSQQSIKEQALVIEYLAVRISMELAIVKPYLPLKNQKAEKKVSIVPLI
ASWIYWGDISTREWLQMSATEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLKKKISSKQRATNDKKRVVAQLAFCIDV
RSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELADENEYKSYEQRKKIDSSVSYTFKT
MKKNVLTSMLLPEVSGPLLGLQMITRSFVPRRVGGFIRNLRKNMLQKPNTTFSLNHVHDTKCEIPIGFTKEEKVNYVRQA
LKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPEDTIFAAAEH
KTTVDELEWIYVPELSEAAQEAFDNIESVMPNVSQHANRERLTQLPNFKMKIKNPSKEAHRFAEDWSEIRPEWGLARNAS
FIIGQRELTQDCDLEGRAFLHNYDWKQDENGDILASIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVMQ
GNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKYIERLLNNDFTFREKVQNGWVRLASVDSEGRWKNW

Specific function: Unknown

COG id: COG3002

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0753 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018752 [H]

Pfam domain/function: PF10070 DUF2309 [H]

EC number: NA

Molecular weight: Translated: 99153; Mature: 99022

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQSIVTKETLKKKDTNIEIQEKNMNDLVESASRVIAPLWPISTFAAHHPWMGLEKQSF
CCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIGLSRWLDSQSFHIPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEISYINTGSMEDSSMQPISSLIENQKGDNLSDVLNY
HHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
HIIKWCKLYLDDSGSSWTMPNREKGLYRAWHHLITFDPALSKNERKVLKDWPQDAQGALT
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHH
KALSELGIPESNRQAYLEGHLLSLPGWAGMIRWRSQQSIKEQALVIEYLAVRISMELAIV
HHHHHCCCCCCCCCEEECCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE
KPYLPLKNQKAEKKVSIVPLIASWIYWGDISTREWLQMSATEQSELLAFAYRFDENTRKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
LWLEAWEQTHAEQLKKKISSKQRATNDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELADENEYKSYEQRKKIDSSVSYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TMKKNVLTSMLLPEVSGPLLGLQMITRSFVPRRVGGFIRNLRKNMLQKPNTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
TKCEIPIGFTKEEKVNYVRQALKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGIKIPEDTIFAAAEHKTTVDELEWIYVPELSEAA
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHEEEECCCCCCHHHCCEEECCCHHHHH
QEAFDNIESVMPNVSQHANRERLTQLPNFKMKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTQDCDLEGRAFLHNYDWKQDENGDILASIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHHHCCCCHHHHHCCCHHHHHCCEEEEEEEECCHHH
IERLLNNDFTFREKVQNGWVRLASVDSEGRWKNW
HHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SIQSIVTKETLKKKDTNIEIQEKNMNDLVESASRVIAPLWPISTFAAHHPWMGLEKQSF
CHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIGLSRWLDSQSFHIPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEISYINTGSMEDSSMQPISSLIENQKGDNLSDVLNY
HHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
HIIKWCKLYLDDSGSSWTMPNREKGLYRAWHHLITFDPALSKNERKVLKDWPQDAQGALT
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHH
KALSELGIPESNRQAYLEGHLLSLPGWAGMIRWRSQQSIKEQALVIEYLAVRISMELAIV
HHHHHCCCCCCCCCEEECCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE
KPYLPLKNQKAEKKVSIVPLIASWIYWGDISTREWLQMSATEQSELLAFAYRFDENTRKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
LWLEAWEQTHAEQLKKKISSKQRATNDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNNSHPSLPVILKPKHQIKELADENEYKSYEQRKKIDSSVSYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TMKKNVLTSMLLPEVSGPLLGLQMITRSFVPRRVGGFIRNLRKNMLQKPNTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
TKCEIPIGFTKEEKVNYVRQALKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGIKIPEDTIFAAAEHKTTVDELEWIYVPELSEAA
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHEEEECCCCCCHHHCCEEECCCHHHHH
QEAFDNIESVMPNVSQHANRERLTQLPNFKMKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTQDCDLEGRAFLHNYDWKQDENGDILASIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLSGLPWQSVMQSDSETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHHHCCCCHHHHHCCCHHHHHCCEEEEEEEECCHHH
IERLLNNDFTFREKVQNGWVRLASVDSEGRWKNW
HHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA