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The map label for this gene is pepF [H]

Identifier: 222096365

GI number: 222096365

Start: 2644012

End: 2645595

Strand: Reverse

Name: pepF [H]

Synonym: BCQ_2705

Alternate gene names: 222096365

Gene position: 2645595-2644012 (Counterclockwise)

Preceding gene: 222096366

Following gene: 222096364

Centisome position: 50.74

GC content: 31.5

Gene sequence:

>1584_bases
ATGCATGAAATTGCTAGATGGGATTTAGATCGATTATATACGTGTGGAGACATTATATTTCCAATATTGGAGTTAAAAGA
GCAATATATTGTGACAAAGGACGTAGAAATCCTTTCAAAACTTATTCAAGCTATTGAAAAAGCAGAATACTATTTGTACT
GTCGATTGACTGAAGAAAGTGTTTCATCTGACATTACTAGATTGACTGTGAAAGTAAAGGAATTAAAAAGTGAAGTGCAG
CAAGTCATACAGCAAAGTGAAGTGGAAATTACTGATAATACTAGGCTAATAAAAGATGAACTACATGCGTGGGAAAATAT
GTACATACAATTAAGGAATAGGATAGAAATAGAGCACAATAATAAGCAATTATCATTTGGACAAGCAAATCATGTTGCAA
TGAATAGTGATAATGAAAAGGAAAGACTAGAAGTATTCGAGTTATTAACATGTGCTTTACATAAGGAGAAAGAAATTTTT
GCTACTGTATTAAATCAAATAGGAAGATTGCGTAATACGAAGGGTAATGAATTAGAAGATAGAGAGATTTTAGCAAGGTC
CCTTCATGCGAATGGTGTTTCAGAAACTGTATTATTACAAATATGGAATGCGACAGAAGAAAATCTAGATAAATTAGTTA
GTGCTTTAAATGTGTATAAGAAAGGCAGAGCTTCGATTACATGGCATGAACTTATGACAGTAAAGGAGAATAATGAGGTT
ATTATTCCTTTTTCAGTAGCAGTACAAAACATATACGGTGCATTTAAAAATATAGATGAAGAATTAGCAGAATTTGCACG
TCATGCGATAGAAAGTGGTTGGGTAGATGCAGAACCGAGAGAGAATAAACCCCCAGGTGGATTTTGTGCTCCTTTTTTCA
GTGAAAAAGAATCTCGAATCTCTATGCGTTATGACGGAAGTATCGATAGTGTAAGAATACTTGCCCACGAACTAGGACAT
GCTTGGCATTTTTATAATATGAGTTTTGAACAATCCTCTTCTTTTTTAGATGATTATTTGCCAATGAGTACAGCTGAATC
AGCATCTATTTTCTTTGAAACGGTGCTTATAAATTATCTAATTCAAACAACAGATAGTATAGATATAAAAAAGTCATTGC
TTAGCTGGAAAATAAGAAACTGTTTTAATTATGTAATGGCAATTCGAGCATCGTACGAATTTGAGAAGAACTTTTACGAG
AAATGTAAAGAAAGTCCTTTAAGTGCTGATCAAATCGAGAAATTATCTATAGTAGCGCAAGAAAAAGCATATGGAAATTC
ATTATCAGAATATCAGCCGTTCGTGTGGATGAAATATATTCAATTTTATATAGCAGATGTTCCTTTTTATAATTATCCAT
ACACATTTGGGTATTTAGCTAGTTTTAGTTTATTAGAAATAGCTAAAGAAAGTAAAAGTACTTTTCACTTGAAATATAAA
GAGTTTTTACGAGAAACAGGAAAAGCTCCAGTGGAAGAACTGATGAAAAAACATTTTGAAATAAATATAACAAGATATGA
ATTTTGGGATAAAGCTTTTAAACAAATTTCTAAAGATATTGATGAATATTTGCAACTTATGTAA

Upstream 100 bases:

>100_bases
AATCTAAATATTTCAAGATATTAAAATTTATTTATTTCATATATAATTGTGTAGGGAGAAATATCTGTAACTATTTGTAA
AAATAGGGGGCGGCTATAAA

Downstream 100 bases:

>100_bases
GGGGAGAGTAAAGTGAATCACCAACTTATAAAGGGAATACCTTTTTCAACTTTAGAATATGCACAAGTTATAAGTTTATT
AAAAGGTTGGCTACATGAAA

Product: oligoendopeptidase f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MHEIARWDLDRLYTCGDIIFPILELKEQYIVTKDVEILSKLIQAIEKAEYYLYCRLTEESVSSDITRLTVKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRNRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFELLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGVSETVLLQIWNATEENLDKLVSALNVYKKGRASITWHELMTVKENNEV
IIPFSVAVQNIYGAFKNIDEELAEFARHAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETVLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASYEFEKNFYE
KCKESPLSADQIEKLSIVAQEKAYGNSLSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLASFSLLEIAKESKSTFHLKYK
EFLRETGKAPVEELMKKHFEINITRYEFWDKAFKQISKDIDEYLQLM

Sequences:

>Translated_527_residues
MHEIARWDLDRLYTCGDIIFPILELKEQYIVTKDVEILSKLIQAIEKAEYYLYCRLTEESVSSDITRLTVKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRNRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFELLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGVSETVLLQIWNATEENLDKLVSALNVYKKGRASITWHELMTVKENNEV
IIPFSVAVQNIYGAFKNIDEELAEFARHAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETVLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASYEFEKNFYE
KCKESPLSADQIEKLSIVAQEKAYGNSLSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLASFSLLEIAKESKSTFHLKYK
EFLRETGKAPVEELMKKHFEINITRYEFWDKAFKQISKDIDEYLQLM
>Mature_527_residues
MHEIARWDLDRLYTCGDIIFPILELKEQYIVTKDVEILSKLIQAIEKAEYYLYCRLTEESVSSDITRLTVKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRNRIEIEHNNKQLSFGQANHVAMNSDNEKERLEVFELLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGVSETVLLQIWNATEENLDKLVSALNVYKKGRASITWHELMTVKENNEV
IIPFSVAVQNIYGAFKNIDEELAEFARHAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETVLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASYEFEKNFYE
KCKESPLSADQIEKLSIVAQEKAYGNSLSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLASFSLLEIAKESKSTFHLKYK
EFLRETGKAPVEELMKKHFEINITRYEFWDKAFKQISKDIDEYLQLM

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 61706; Mature: 61706

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIARWDLDRLYTCGDIIFPILELKEQYIVTKDVEILSKLIQAIEKAEYYLYCRLTEES
CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHH
VSSDITRLTVKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRNRIEIEHN
HHCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEC
NKQLSFGQANHVAMNSDNEKERLEVFELLTCALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGVSETVLLQIWNATEENLDKLVSALNVYKKGRASITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
IIPFSVAVQNIYGAFKNIDEELAEFARHAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETVLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASYEFEKNFYEKCKESPLSADQIEKLSIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EKAYGNSLSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLASFSLLEIAKESKSTFHLKYK
HHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHH
EFLRETGKAPVEELMKKHFEINITRYEFWDKAFKQISKDIDEYLQLM
HHHHHHCCCHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEIARWDLDRLYTCGDIIFPILELKEQYIVTKDVEILSKLIQAIEKAEYYLYCRLTEES
CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHH
VSSDITRLTVKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRNRIEIEHN
HHCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEC
NKQLSFGQANHVAMNSDNEKERLEVFELLTCALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGVSETVLLQIWNATEENLDKLVSALNVYKKGRASITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
IIPFSVAVQNIYGAFKNIDEELAEFARHAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETVLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASYEFEKNFYEKCKESPLSADQIEKLSIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EKAYGNSLSEYQPFVWMKYIQFYIADVPFYNYPYTFGYLASFSLLEIAKESKSTFHLKYK
HHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHH
EFLRETGKAPVEELMKKHFEINITRYEFWDKAFKQISKDIDEYLQLM
HHHHHHCCCHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]