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The map label for this gene is dapA [H]

Identifier: 222096331

GI number: 222096331

Start: 2613766

End: 2614662

Strand: Reverse

Name: dapA [H]

Synonym: BCQ_2671

Alternate gene names: 222096331

Gene position: 2614662-2613766 (Counterclockwise)

Preceding gene: 222096332

Following gene: 222096330

Centisome position: 50.15

GC content: 36.34

Gene sequence:

>897_bases
ATGAAAAATATTAAAGGGGCATTTCCAGTATTAATCACACCGATGGATGAGTTGCAAGGGATTAATTGGAACGGTGTAAA
ACAAAACGTAAACTACTTTATTGAGCAAAAAGTGGCTGGCATTATTATTAATGGAAGCACAGGAGAGTTTGTGAGTTTAT
CAAAAGAAGAACGATTTAAAATGGTAGAAACAGTATTAAAAGAAGTTGATGGTCGTATACCAGTTATTGTTGGAACTGCT
GCGGAGACGACGAAAGAGACGATTGAATATACGAAACATGCAGAAGCGCATGGAGCGGATTGTGCATTAATTATAAATTC
GTATTATTGTAAACCGAAAGAAGAGGAAATATATTTTCATTTTAAAGAAATCTCAAACGCTGTAAATATTCCAATTATGT
TATACAATAACCCGTTTACATCTGGTGTTGATATGAGTACAGAACTCATGCTACGTATTGGAAAAGAGTGTGAAAATGTT
ACACATATTAAAGAATCTAGCGGAGATATTCGAAAAGCGAGAGATTTAGTAAGACAAGGCGAAGGTGCGTTTCAAGTATT
CTGTGGATCTGAAGATTTAGTTATGGAATCTTATTTAGTTGGTGCGACGGGCTGGGTTTCAGTAGCAGGTAATATCGTAC
CGGGACTTGTTACGAAAATGTATGAGCATTTTCATAATGGTGAATTAGAAAAAGCTTGGGAAATAAACGACGCTATTTTA
CCTCTTTGCGAGTTTCTTGAAGGATCAGGAAAGTATGTGCAAATTGTGAAACGATCAATGGAATTACACGGGCAAGCTGG
AGGACCTTCACGTTATCCGAGACTCGGATTAACTGAAGAAGAAGATCAAAAACTTCAAACGATTATTTCAAAAATTGCAG
CTCATGCAGCTGTTTAA

Upstream 100 bases:

>100_bases
AGAGGATTTATTACAGGGATGCAGACGTTTCTATTAGATCCTACAGATCCGTTTCCGACAGGATTTTTATTAAAATAAAA
TAGTAAAGGGAGAGATAAAT

Downstream 100 bases:

>100_bases
ATAAGGAGGAGAGCATAAATGTTAACGAAAAACATTGAACTAAAACCAAAAGTGAAAGCGTTTTTAAATGAAGAAATTAA
AATGTTTATTAATGGTGAAT

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKNIKGAFPVLITPMDELQGINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVDGRIPVIVGTA
AETTKETIEYTKHAEAHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKECENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNIVPGLVTKMYEHFHNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELHGQAGGPSRYPRLGLTEEEDQKLQTIISKIAAHAAV

Sequences:

>Translated_298_residues
MKNIKGAFPVLITPMDELQGINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVDGRIPVIVGTA
AETTKETIEYTKHAEAHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKECENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNIVPGLVTKMYEHFHNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELHGQAGGPSRYPRLGLTEEEDQKLQTIISKIAAHAAV
>Mature_298_residues
MKNIKGAFPVLITPMDELQGINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVDGRIPVIVGTA
AETTKETIEYTKHAEAHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKECENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNIVPGLVTKMYEHFHNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELHGQAGGPSRYPRLGLTEEEDQKLQTIISKIAAHAAV

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=288, Percent_Identity=25, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI13540533, Length=279, Percent_Identity=30.8243727598566, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI87082415, Length=267, Percent_Identity=28.4644194756554, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1786463, Length=244, Percent_Identity=29.5081967213115, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1788823, Length=237, Percent_Identity=29.957805907173, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789620, Length=235, Percent_Identity=24.2553191489362, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33121; Mature: 33121

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00665 DHDPS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKGAFPVLITPMDELQGINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFK
CCCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCEEECCHHHHHH
MVETVLKEVDGRIPVIVGTAAETTKETIEYTKHAEAHGADCALIINSYYCKPKEEEIYFH
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEEE
FKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKECENVTHIKESSGDIRKARDLVRQG
HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
EGAFQVFCGSEDLVMESYLVGATGWVSVAGNIVPGLVTKMYEHFHNGELEKAWEINDAIL
CCCEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHH
PLCEFLEGSGKYVQIVKRSMELHGQAGGPSRYPRLGLTEEEDQKLQTIISKIAAHAAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNIKGAFPVLITPMDELQGINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFK
CCCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCEEECCHHHHHH
MVETVLKEVDGRIPVIVGTAAETTKETIEYTKHAEAHGADCALIINSYYCKPKEEEIYFH
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEEE
FKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKECENVTHIKESSGDIRKARDLVRQG
HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
EGAFQVFCGSEDLVMESYLVGATGWVSVAGNIVPGLVTKMYEHFHNGELEKAWEINDAIL
CCCEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHH
PLCEFLEGSGKYVQIVKRSMELHGQAGGPSRYPRLGLTEEEDQKLQTIISKIAAHAAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]