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The map label for this gene is dal [H]

Identifier: 222095721

GI number: 222095721

Start: 2038101

End: 2039276

Strand: Direct

Name: dal [H]

Synonym: BCQ_2061

Alternate gene names: 222095721

Gene position: 2038101-2039276 (Clockwise)

Preceding gene: 222095719

Following gene: 222095725

Centisome position: 39.09

GC content: 35.12

Gene sequence:

>1176_bases
ATGAGTTTGAAATATGGAAGAGATACAATTGTTGAAGTTGACTTAAATGCAGTAAAACATAATGTAAAAGAATTTAAAAA
ACGTGTGAATGATGAAAATATTGCAATGATGGCTGCTGTAAAAGCGAATGGATATGGTCATGGGGCAGTTGAAGTTGCAA
AAGCTGCTATTGAAGCAGGAATAAATCAGCTTGCAGTTGCATTTGTAGATGAAGCGATAGAGTTAAGAGAAGCAGGAATT
AACGTGCCGATTTTAATTTTAGGCTATACGTCAGTAGCATCTGCGGAAGAAGCAATTCAATATGATGTAATGATGACTGT
TTATAGAAGTGAAGATTTACAAGGTATAAATGAAATCGCAAACCGTCTACAAAAGAAGGCGCAAATTCAGGTGAAAATTG
ATACAGGAATGAGTCGCATTGGTTTACAGGAAGAAGAGGTTAAACCATTTTTAGAGGAATTAAAACGTATGGAGTATGTA
GAGGTAGTAGGAATGTTTACACATTACTCTACGGCAGATGAAATCGATAAATCATATACGAATATGCAAACAAGTTTATT
TGAAAAAGCTGTCAATACAGCAAAAGAATTAGGAATTCATATTCCATATATTCATAGTTCAAATAGTGCAGGTTCAATGG
AACTTAGCAATACATTTCAAAATATGGTTCGTGTAGGTATTGGAATTTATGGAATGTATCCTTCAAAAGAGGTAGATCAT
TCAGTTGTTTCTCTGCAGCCTGCGTTGTCGTTAAAATCAAAAGTAGCTCATATTAAGCATGCAAAGAAAAATCGCGGTGT
AAGTTATGGGAATACGTATGTAACGACTGGTGAAGAATGGATTGCCACTATACCGATTGGTTATGCGGATGGCTATAACC
GTCAGTTATCTAATAAAGGGCATGCATTAATAAATGGGGTTCGAGTACCTGTTATTGGTCGTGTTTGTATGGATCAGCTC
ATGTTAGACGTTTCAAAAGCAATGCCAGTACAAGTGGGAGACGAAGTAGTATTCTACGGTAAACAAGGCGAAGAAAATAT
TGCAGTAGAAGAAATAGCGGATATGTTAGGTACAATTAACTATGAAGTTACATGTATGTTAGACAGAAGAATTCCACGTG
TATATAAAGAAAATAATGAAACGACTGCTATTGTAAATATACTAAGAAAAAACTGA

Upstream 100 bases:

>100_bases
CTAGTAGTTTGACTAGCATATTGAAAAGTATTATATTGTAAAAGGTCATATGAAACGTGAAATAGAATGGAATGCAATTA
TTGAGTTAGGAGTTAGACCA

Downstream 100 bases:

>100_bases
ATCGTTATGATTCAGTTTTTTTATTTTTGACAAATGAAAAATGTTCTATTTGTACCGTGTGATTGAATGTCCTTAAAACC
TACGGATTCTAGCAAAGAAA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGI
NVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAIVNILRKN

Sequences:

>Translated_391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGI
NVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAIVNILRKN
>Mature_390_residues
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGIN
VPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVE
VVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHS
VVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQLM
LDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAIVNILRKN

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=369, Percent_Identity=29.810298102981, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787439, Length=373, Percent_Identity=29.7587131367292, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 43419; Mature: 43288

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
INQLAVAFVDEAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHHHH
NRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAIVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHHHHCC
>Mature Secondary Structure 
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
INQLAVAFVDEAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHHHH
NRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAIVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA