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The map label for this gene is yfbE [C]

Identifier: 222095594

GI number: 222095594

Start: 1916959

End: 1918089

Strand: Direct

Name: yfbE [C]

Synonym: BCQ_1934

Alternate gene names: 222095594

Gene position: 1916959-1918089 (Clockwise)

Preceding gene: 222095593

Following gene: 222095595

Centisome position: 36.76

GC content: 35.63

Gene sequence:

>1131_bases
ATGGAGAATATTCCTTTTTTACGTGCTTCAACTGTACCTGTAATTGAGTATTTGGATGAATTGAAGGAAATTGATACATC
TCACATATATACGAATTACGGACCTATAAATCAACGTTTTGAACAAACAATTATGTCGGGATTTTTTCAGAACAGGGGAG
CTGTTACAACAGTAGCAAACGCAACGTTAGGGTTAATGGCGGCCATTCAACTTAAGAAAAGAAAAAAAGGAAAGTATGCC
CTCATGCCTAGTTTTACATTCCCTGCGACTCCATTAGCAGCTATTTGGTGTGGATTGGAACCTTATTTTATTGATATTTC
AATAGATGATTGGTATATGGATAAAACAGTACTTTTGGATAAGATTGAAGAATTAAAAGAAGAGGTTGCGATTGTTGTCC
CGTACGCAACGTTTGGATCATGGATGAACTTAGAAGAATATGAAGAATTAGAAAAGAGGGGTGTTCCGGTTGTCGTAGAT
GCGGCACCGGGATTCGGATTAATGAATGGAATTGTGCATTATGGACAGGGGTTTAGTGGAATGATCGTATATAGTTTTCA
TGCAACAAAGCCTTTTGGGATTGGTGAAGGAGGGCTTATATATAGTAAAAACGAAGAAGATATACAATGTATTAAAAGGA
TGGGTAATTTCGGATTTGATAAAAATCGTGAATGTACGATGATGGGGTTTAATTGTAAAATGTCTGAATATGCAGCCGCT
ATTGGGATTGCAACTATGAAAAAATGGGATGACAAATTAAAAGAACGCACCCGTATTTCTGAATGGTATAAACAATTGTT
ACAAAGTAATGGATTCATAAAAAAAGGGTGGCAACTCCAAAAGACAGAAGCAGTTATTCAGCAATTTATGCCTATTCTTT
GTCCAGAAGAAGTTCGCAACAAACAAGTAATAGAAGACCTGAAAAAACAGAAAATAGAAGCTAGATTATACTTTTCGCCC
TCTTGCCATCAACAAGTTCTTTTTAAAAATTATAAGTCTACAGATTTAACAACAACGAATAAAATAGCAAAACGAATAGT
AAGTTTACCTTTATGGGAAGGAATGACGAAAGAAATAGTAGAACAAATTGTAAGATGTTTAGGTCAGAGGGCGGTGTTGG
CAGATGAATAG

Upstream 100 bases:

>100_bases
ATAGCTGAAAAACAAGGGATGAAAAGTGCTAGGAAATTTGGCTTATCTGAAACAGATATGCTCTATATTGTCCGAAAATG
ATAGGAAGGAATAGATAGAT

Downstream 100 bases:

>100_bases
TTTTTATAGTCAAGAAGAGCTAAAGAAAATTGGATTTTTATCAATTGGGAAGAATGTATTGATTAGTAAAAAAGCAAGTA
TATATAATCCAGGTGTTATA

Product: degt/dnrj/eryc1/strs family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MENIPFLRASTVPVIEYLDELKEIDTSHIYTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYA
LMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLLDKIEELKEEVAIVVPYATFGSWMNLEEYEELEKRGVPVVVD
AAPGFGLMNGIVHYGQGFSGMIVYSFHATKPFGIGEGGLIYSKNEEDIQCIKRMGNFGFDKNRECTMMGFNCKMSEYAAA
IGIATMKKWDDKLKERTRISEWYKQLLQSNGFIKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSP
SCHQQVLFKNYKSTDLTTTNKIAKRIVSLPLWEGMTKEIVEQIVRCLGQRAVLADE

Sequences:

>Translated_376_residues
MENIPFLRASTVPVIEYLDELKEIDTSHIYTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYA
LMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLLDKIEELKEEVAIVVPYATFGSWMNLEEYEELEKRGVPVVVD
AAPGFGLMNGIVHYGQGFSGMIVYSFHATKPFGIGEGGLIYSKNEEDIQCIKRMGNFGFDKNRECTMMGFNCKMSEYAAA
IGIATMKKWDDKLKERTRISEWYKQLLQSNGFIKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSP
SCHQQVLFKNYKSTDLTTTNKIAKRIVSLPLWEGMTKEIVEQIVRCLGQRAVLADE
>Mature_376_residues
MENIPFLRASTVPVIEYLDELKEIDTSHIYTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYA
LMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLLDKIEELKEEVAIVVPYATFGSWMNLEEYEELEKRGVPVVVD
AAPGFGLMNGIVHYGQGFSGMIVYSFHATKPFGIGEGGLIYSKNEEDIQCIKRMGNFGFDKNRECTMMGFNCKMSEYAAA
IGIATMKKWDDKLKERTRISEWYKQLLQSNGFIKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSP
SCHQQVLFKNYKSTDLTTTNKIAKRIVSLPLWEGMTKEIVEQIVRCLGQRAVLADE

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=387, Percent_Identity=26.0981912144703, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42972; Mature: 42972

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIPFLRASTVPVIEYLDELKEIDTSHIYTNYGPINQRFEQTIMSGFFQNRGAVTTVAN
CCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCEEEHHH
ATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLLD
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCEEEEEEEECCHHCHHHHHHH
KIEELKEEVAIVVPYATFGSWMNLEEYEELEKRGVPVVVDAAPGFGLMNGIVHYGQGFSG
HHHHHHHHHEEEEEEHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCC
MIVYSFHATKPFGIGEGGLIYSKNEEDIQCIKRMGNFGFDKNRECTMMGFNCKMSEYAAA
EEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
IGIATMKKWDDKLKERTRISEWYKQLLQSNGFIKKGWQLQKTEAVIQQFMPILCPEEVRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
KQVIEDLKKQKIEARLYFSPSCHQQVLFKNYKSTDLTTTNKIAKRIVSLPLWEGMTKEIV
HHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHCCCHHHHHH
EQIVRCLGQRAVLADE
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MENIPFLRASTVPVIEYLDELKEIDTSHIYTNYGPINQRFEQTIMSGFFQNRGAVTTVAN
CCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCEEEHHH
ATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLLD
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCEEEEEEEECCHHCHHHHHHH
KIEELKEEVAIVVPYATFGSWMNLEEYEELEKRGVPVVVDAAPGFGLMNGIVHYGQGFSG
HHHHHHHHHEEEEEEHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCC
MIVYSFHATKPFGIGEGGLIYSKNEEDIQCIKRMGNFGFDKNRECTMMGFNCKMSEYAAA
EEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
IGIATMKKWDDKLKERTRISEWYKQLLQSNGFIKKGWQLQKTEAVIQQFMPILCPEEVRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
KQVIEDLKKQKIEARLYFSPSCHQQVLFKNYKSTDLTTTNKIAKRIVSLPLWEGMTKEIV
HHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHCCCHHHHHH
EQIVRCLGQRAVLADE
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]