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The map label for this gene is cydA [H]

Identifier: 222095588

GI number: 222095588

Start: 1906959

End: 1908140

Strand: Direct

Name: cydA [H]

Synonym: BCQ_1928

Alternate gene names: 222095588

Gene position: 1906959-1908140 (Clockwise)

Preceding gene: 222095587

Following gene: 222095589

Centisome position: 36.57

GC content: 37.82

Gene sequence:

>1182_bases
ATGGAAACGCTCGAATTGGCACGAATACAATTCGCATCAACAACGATTTTCCATTACTTTTTTGTTCCGCTGTCTATTGG
TTTAGCTTTTATCATTGCGTTAATGCAAACGTTATATGTGGTAAAGGGACAAGAAATTTATAAGAAGATGACGAAGTTTT
GGACACAAATATTCCTTGTTAACTTTGCGGTAGGTGTAGTAACTGGTATTCTACAAGAATTCCAGTTTGGTATGAACTGG
TCAACCTATTCACGCTTCGTAGGTGATGTGTTTGGTCCATCACTTGCGATTGAAGGTTTATTAGCATTTTTCATTGAGTC
TACATTTTTAGGTTTATGGGTATTCGGTGAGGATAAATTACCGAAGCGCATTCACCTTTTATGTATTTGGCTCCTTTCAA
TTGGAACAATGTTATCAGCATTTTGGATTTTAACTGCAAGTGCATTTATGCAATCACCGGTAGGATATGAAATGGCAGCC
GATGGACGTGCACAAATGAATGATTTCTTAGCGATCATTCAAAATCCACAATTATGGGTGCAATTCCCGCATACAATTAC
AGCGGCAATTGCAACGGGTGCATTCTTTATTGCAGGTGTGAGTGCATGGAAAATAACGAAAGCTCAAGAAACGGAAGTGT
TTAAAAAATCATTCCGCATTTCTATCATTGTTGGAACACTTACAACTGCGCTTGTATTATTCTTCGGTCATGCGCAAGCA
CAACAATTAATTAAGACACACCCAATGAAAATGGCAGCAGCTGAAGCGTTATGGAATACGAGTGAAGATCCAGCGCCATT
TACAGTATTTGCGAAAATTGATGCAGAGAAGAAAGAAAATTCGTTTGAAATTCAAATCCCGTATATGCTAAGTCTATTAT
CATATGATAAATTTAGCGGTCAAGTAGAAGGGATGAATCAAATTCAAAAGCAATATGAAGAAAAATATGGGCCTGGAGAT
TATATTCCACCAGTACACACGATGTTCTGGAGCTTTAGAGCGATGGTAATGAGTGGAACATTTATGCTTCTTCTAGGAGC
GTACGGATGGTTCTTATCAAGAAAAGATCGTTTAGCTGAAAAAACTTGGTATTTAAAATTAATGGTGTATGCAATTTCAC
TACCGTTTATCGGTAATACAGTAGGATGGATTATGACTGAAATGGGACGTCACCTTGGGTAG

Upstream 100 bases:

>100_bases
AACAAATTTATCTTTCTACATTTCTAAGATTTGAGTTGTTTTATTCATACAACTCAATTGAAATTACGATATAAAAAATT
ATGAAGGAAGTGATTGTAGT

Downstream 100 bases:

>100_bases
TTTTCGGTGTTATGAAAACGGAAGATGCTGTATCTCCAAATGTTACGTTCGGAGAAGTGCTATTCTCTTTAGTTTCGTTC
ACATCATTATATTTAATTAT

Product: cytochrome d ubiquinol oxidase, subunit i

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLLLGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRHLG

Sequences:

>Translated_393_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLLLGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRHLG
>Mature_393_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLLLGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRHLG

Specific function: Cytochrome D Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At Low Aeration. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=448, Percent_Identity=36.8303571428571, Blast_Score=307, Evalue=8e-85,
Organism=Escherichia coli, GI1787212, Length=447, Percent_Identity=37.1364653243848, Blast_Score=298, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 44578; Mature: 44578

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAVGVVTGILQEFQFGMNWSTYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCC
PKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAADGRAQMNDFLAIIQNPQLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCEEE
QFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
ECCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCHHH
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSG
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCC
QVEGMNQIQKQYEEKYGPGDYIPPVHTMFWSFRAMVMSGTFMLLLGAYGWFLSRKDRLAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTWYLKLMVYAISLPFIGNTVGWIMTEMGRHLG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAVGVVTGILQEFQFGMNWSTYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCC
PKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAADGRAQMNDFLAIIQNPQLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCEEE
QFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
ECCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCHHH
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSG
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCC
QVEGMNQIQKQYEEKYGPGDYIPPVHTMFWSFRAMVMSGTFMLLLGAYGWFLSRKDRLAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTWYLKLMVYAISLPFIGNTVGWIMTEMGRHLG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]