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The map label for this gene is ccdC [H]

Identifier: 222095551

GI number: 222095551

Start: 1870489

End: 1870968

Strand: Direct

Name: ccdC [H]

Synonym: BCQ_1891

Alternate gene names: 222095551

Gene position: 1870489-1870968 (Clockwise)

Preceding gene: 222095550

Following gene: 222095553

Centisome position: 35.87

GC content: 32.5

Gene sequence:

>480_bases
ATGATAGCACTTTTATCAAGTATTGTAGCAGTTTGTATGGCTGTTGGGGTAATGTTTCTTCGCTTTAAAGCAGCGAAAAA
GCCGGTAACGAAAAAGAAAATAATATTGCCGCCAATTTTTATGAGTACTGGCGCAATGATGTACTTCTTACCAGCGTTTC
GATTAACATCGTTAGAAATAGTAGAGGCGATTAGTATAGGACTTATTTTCTCTATATTTCTTATTAAAACAACGAAGTTT
GAAATAAGAAATGAACATATATATATGAAACCGTCAAAAGCATTCATATTTATTTTAGTTGGATTATTAGCAGTGCGAGT
AGTAATGAAATCGTATTTAAGTCAATCGATTGACTTAGCAGAGTTAAGTGGAATGTTTTTCTTACTCGCTTTTGCGATGA
TTGTATCGTGGAGAATTGCTATGTATCGTTCCTATGCTAAATTAGAAAAAACAATAAAAAGAGCTGGAATTTCTATATAG

Upstream 100 bases:

>100_bases
AGGAGGGATATAATGAAGAAATTCTATAATGGTGCTTGTAGTTACTTATTAATTTATGATTTTGCTCAAAAAGTCATTTA
AATAGATAGGAGTGGAAAGT

Downstream 100 bases:

>100_bases
GAAATCCAGCTCTTTTTATGTTTTATTAAAATTCTTTAACGCGGAACTCATTTGCTTAATTTTAAACGTATTTGAGCATC
TTGTAATGCCGCTGGCGTAA

Product: cyotchrome c defective protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIALLSSIVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPAFRLTSLEIVEAISIGLIFSIFLIKTTKF
EIRNEHIYMKPSKAFIFILVGLLAVRVVMKSYLSQSIDLAELSGMFFLLAFAMIVSWRIAMYRSYAKLEKTIKRAGISI

Sequences:

>Translated_159_residues
MIALLSSIVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPAFRLTSLEIVEAISIGLIFSIFLIKTTKF
EIRNEHIYMKPSKAFIFILVGLLAVRVVMKSYLSQSIDLAELSGMFFLLAFAMIVSWRIAMYRSYAKLEKTIKRAGISI
>Mature_159_residues
MIALLSSIVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPAFRLTSLEIVEAISIGLIFSIFLIKTTKF
EIRNEHIYMKPSKAFIFILVGLLAVRVVMKSYLSQSIDLAELSGMFFLLAFAMIVSWRIAMYRSYAKLEKTIKRAGISI

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 17931; Mature: 17931

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLSSIVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPAFRLTSLEI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
VEAISIGLIFSIFLIKTTKFEIRNEHIYMKPSKAFIFILVGLLAVRVVMKSYLSQSIDLA
HHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELSGMFFLLAFAMIVSWRIAMYRSYAKLEKTIKRAGISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIALLSSIVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPAFRLTSLEI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
VEAISIGLIFSIFLIKTTKFEIRNEHIYMKPSKAFIFILVGLLAVRVVMKSYLSQSIDLA
HHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELSGMFFLLAFAMIVSWRIAMYRSYAKLEKTIKRAGISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]