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The map label for this gene is dsdA [H]

Identifier: 222095453

GI number: 222095453

Start: 1757522

End: 1757899

Strand: Direct

Name: dsdA [H]

Synonym: BCQ_1793

Alternate gene names: 222095453

Gene position: 1757522-1757899 (Clockwise)

Preceding gene: 222095452

Following gene: 222095454

Centisome position: 33.71

GC content: 37.04

Gene sequence:

>378_bases
ATGATAAAAATCGCCGTTCAAGATATCGGAATTGATAATGTAACAGACGCAGACGGACTTGCGGTAGGAAGGCCGTCTGG
ATTTGTCGGTAAAACGATGGAACCATTTTTGAGTGGGAATTACACAGTAAGCGATGAAGAGTTATATAGATTGTTAAAAG
AACTAGCTGATACAGAGAATATTTATTTAGAGCCTTCTGCATTAGCTGGTATGATAGGACCAGTAAAAGTATGTAAAGAA
GATGCGTATTTACAAGAGCAACAGTTAATGAAGGAGATGAAAAAAGGTACTCATATTGTATGGGGAACTGGTGGTAGTAT
GGTTCCAGAAGATGTGATAAATGGGTATTATAAAACGGGTGAGAGATTAACAATATAA

Upstream 100 bases:

>100_bases
GCATTTGGTTTAAAGTTATTATATAAAGACAACGTACACTGTTTCTTTGCAGAGCCAACACATTCACCATGTATGTTACT
CGGGTTAATGACAGGACTTC

Downstream 100 bases:

>100_bases
GAAAAATGAGGCTAGTTGTAGCCTCATTTTTTCATGTACATAAAAATCTTTGTTATTTTCACAATAGTTCTTTATAGTAT
ATATAAAGGATAATTAATAT

Product: d-serine dehydratase

Products: NA

Alternate protein names: D-serine deaminase; DSD [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MIKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTENIYLEPSALAGMIGPVKVCKE
DAYLQEQQLMKEMKKGTHIVWGTGGSMVPEDVINGYYKTGERLTI

Sequences:

>Translated_125_residues
MIKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTENIYLEPSALAGMIGPVKVCKE
DAYLQEQQLMKEMKKGTHIVWGTGGSMVPEDVINGYYKTGERLTI
>Mature_125_residues
MIKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTENIYLEPSALAGMIGPVKVCKE
DAYLQEQQLMKEMKKGTHIVWGTGGSMVPEDVINGYYKTGERLTI

Specific function: Unknown

COG id: COG3048

COG function: function code E; D-serine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine/threonine dehydratase family. DsdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788708, Length=120, Percent_Identity=55.8333333333333, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011780
- InterPro:   IPR001926
- InterPro:   IPR000634 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.18 [H]

Molecular weight: Translated: 13718; Mature: 13718

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTEN
CEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCEECHHHHHHHHHHHCCCCC
IYLEPSALAGMIGPVKVCKEDAYLQEQQLMKEMKKGTHIVWGTGGSMVPEDVINGYYKTG
EEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCC
ERLTI
CEECC
>Mature Secondary Structure
MIKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTEN
CEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCEECHHHHHHHHHHHCCCCC
IYLEPSALAGMIGPVKVCKEDAYLQEQQLMKEMKKGTHIVWGTGGSMVPEDVINGYYKTG
EEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCC
ERLTI
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA