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The map label for this gene is dsdA [H]

Identifier: 222095452

GI number: 222095452

Start: 1756567

End: 1757556

Strand: Direct

Name: dsdA [H]

Synonym: BCQ_1792

Alternate gene names: 222095452

Gene position: 1756567-1757556 (Clockwise)

Preceding gene: 222095450

Following gene: 222095453

Centisome position: 33.69

GC content: 36.57

Gene sequence:

>990_bases
ATGAAGGGAATAGAGAAATTAAAAGAGGGATATCCACTCTTAAATAAATTAATCGCAACAGAAGAAGTGTTTTGGGTGAA
TCCGAACATGGAAAAGTATGAAACGGCAATAAAAGATTCGCCACTCAGTGAAGAGAATGTAAAAGATGCGGAGGAGAGGT
TAAAGCGTTTTGCATCATACATTGCGAAAGTTTTTCCTGAAACGAAAGAGACGAAAGGCATCATTGAATCACCTTTATTG
AAAATCCCTTCTATGAAACAAGCTTTAGAGAAACATTACAAGCAACCTATTTTAGGAGAATTATTATTAAAATGTGATAG
CCATCTCCCAATATCAGGATCAATTAAAGCTAGAGGCGGCATTTATGAAGTGTTGAAACATGCTGAACAATTAGCTTTGC
AGCATGGTATGTTAACAGAAGAAGCTGATTATTCCATTTTAGATAGTGATACATGTAGAGAGTTTTTTGCAAAATACTCA
ATTGCTGTAGGTTCTACAGGTAATTTAGGGCTAAGCATTGGGATTATGAGTGCGAAACTAGGTTTTAACGTAACGGTTCA
TATGTCAGCAGACGCGAAACAATGGAAAAAAGATTTATTAAGAAGTAAAGGTGTAAATGTTATTGAATATGAAGCTGATT
ATAGTAAAGCAGTAAAAGAGGGGCGTCAGCAAGCAGATACAGATCCTAGTTGTTATTTTGTAGATGATGAAAACTCACAT
GATTTATTTTTAGGATACGCAGTAGCAGCATCGCGTTTACAAAAACAATTAGAAGAGTTAGAGATTGTAGTGGACGAAGA
ACATCCTTTATTCGTTTATCTACCATGCGGAGTAGGGGGCGGACCTGGCGGAGTCGCATTTGGTTTAAAGTTATTATATA
AAGACAACGTACACTGTTTCTTTGCAGAGCCAACACATTCACCATGTATGTTACTCGGGTTAATGACAGGACTTCATGAT
AAAAATCGCCGTTCAAGATATCGGAATTGA

Upstream 100 bases:

>100_bases
TAAAATTAACTAAAGTGAAAAATTTATGTTAAACTATATTAAAATTAATTTAATTATAATTTATTAAATCGTAAGCTACA
AGGTGATGAGGAGGAAGAGA

Downstream 100 bases:

>100_bases
TAATGTAACAGACGCAGACGGACTTGCGGTAGGAAGGCCGTCTGGATTTGTCGGTAAAACGATGGAACCATTTTTGAGTG
GGAATTACACAGTAAGCGAT

Product: d-serine dehydratase

Products: NA

Alternate protein names: D-serine deaminase; DSD [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKGIEKLKEGYPLLNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIESPLL
KIPSMKQALEKHYKQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEQLALQHGMLTEEADYSILDSDTCREFFAKYS
IAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVKEGRQQADTDPSCYFVDDENSH
DLFLGYAVAASRLQKQLEELEIVVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCFFAEPTHSPCMLLGLMTGLHD
KNRRSRYRN

Sequences:

>Translated_329_residues
MKGIEKLKEGYPLLNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIESPLL
KIPSMKQALEKHYKQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEQLALQHGMLTEEADYSILDSDTCREFFAKYS
IAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVKEGRQQADTDPSCYFVDDENSH
DLFLGYAVAASRLQKQLEELEIVVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCFFAEPTHSPCMLLGLMTGLHD
KNRRSRYRN
>Mature_329_residues
MKGIEKLKEGYPLLNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIESPLL
KIPSMKQALEKHYKQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEQLALQHGMLTEEADYSILDSDTCREFFAKYS
IAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVKEGRQQADTDPSCYFVDDENSH
DLFLGYAVAASRLQKQLEELEIVVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCFFAEPTHSPCMLLGLMTGLHD
KNRRSRYRN

Specific function: Unknown

COG id: COG3048

COG function: function code E; D-serine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine/threonine dehydratase family. DsdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788708, Length=311, Percent_Identity=64.951768488746, Blast_Score=404, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011780
- InterPro:   IPR001926
- InterPro:   IPR000634 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.18 [H]

Molecular weight: Translated: 36839; Mature: 36839

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIEKLKEGYPLLNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASY
CCHHHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IAKVFPETKETKGIIESPLLKIPSMKQALEKHYKQPILGELLLKCDSHLPISGSIKARGG
HHHHCCCCHHHCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
IYEVLKHAEQLALQHGMLTEEADYSILDSDTCREFFAKYSIAVGSTGNLGLSIGIMSAKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEC
GFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVKEGRQQADTDPSCYFVDDENSH
CCEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCC
DLFLGYAVAASRLQKQLEELEIVVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCF
EEEHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCHHHHHHHHEEECCEEEE
FAEPTHSPCMLLGLMTGLHDKNRRSRYRN
EECCCCCHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MKGIEKLKEGYPLLNKLIATEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASY
CCHHHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IAKVFPETKETKGIIESPLLKIPSMKQALEKHYKQPILGELLLKCDSHLPISGSIKARGG
HHHHCCCCHHHCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
IYEVLKHAEQLALQHGMLTEEADYSILDSDTCREFFAKYSIAVGSTGNLGLSIGIMSAKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEC
GFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVKEGRQQADTDPSCYFVDDENSH
CCEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCC
DLFLGYAVAASRLQKQLEELEIVVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCF
EEEHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCHHHHHHHHEEECCEEEE
FAEPTHSPCMLLGLMTGLHDKNRRSRYRN
EECCCCCHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA