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The map label for this gene is fliM [H]

Identifier: 222095386

GI number: 222095386

Start: 1697277

End: 1698263

Strand: Direct

Name: fliM [H]

Synonym: BCQ_1726

Alternate gene names: 222095386

Gene position: 1697277-1698263 (Clockwise)

Preceding gene: 222095385

Following gene: 222095387

Centisome position: 32.55

GC content: 38.7

Gene sequence:

>987_bases
ATGAGTGGCGATAAATTAAGCCAAGAGCAAATTGATGCCCTGCTGAAGGCGGTAAATGAAGGCGAGGAAATGCCAGCTTT
CGCACAAGAAGCAGGGAAGCAAGATAAATTTCAAGAGTATGATTTTAATAGACCAGAGAAGTTCGGTGTTGAACATTTAC
GTAGCTTGCAAGCGATTGCTTCTACGTTTGGTAAACAGACGTCACAGACGTTATCTGCGCGTATGCGTATTCCGATTGAC
TTAGAGCCTTCGACAGTGGAGCAAGTTCCATTTACGAGTGAGTATGTGGAGAAAATGCCGAAAGATTACTATTTATATTG
CGTCATTGATCTCGGACTTCCAGAGCTTGGAGAAATTGTTATTGAAATTGATTTAGCATTTGTTATTTACATTCATGAGT
GCTGGCTTGGCGGGGATAGTAAGCGTAATTTTACGATGCGTAGACCACTGACGGCATTCGAGTTTTTAACGCTTGATAAT
ATTTTTGCGCTTCTATGCAAAAATTTAGAGCAATCATTTGAAAGCGTTGTGGCGATTAAACCGACATTTGTAACGACAGA
GACAGATCCGAATGCACTTAAGATTACGACAGCGAGTGATATTATTTCATTACTGAACGTAAATATGAAAACGGATTTTT
GGAATACGACAGTTCGTATTGGGATTCCGTTCTTATCTGTTGAAGAAATTATGGATAAGTTAACGTCTGAAAATATTGTC
GAACATTCTTCGGATAAGCGTAAAAAGTATACGTCTGAAGTAGAAGTGAAAGTAAATCAAGTGTATAAACCAGTTCATGT
TGCGATTGGTGAGCAGAAGATGACGATGGGCGAGATTGAACAAATTGAAGAAGGCGATATTATTCCGCTTCATACGAAAG
TTTCGGATGAGTTGCTTGGTTTTGTAGATGGAAAACATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCG
CTCCTATTTAAAAGTTTTGTAGAGTAG

Upstream 100 bases:

>100_bases
TGCTTGAGAATGAAGAGATTGGAACCGGAAAGATTTTGACGAAGAATGGAAAAATGTACGTTGAAATCGTTGAATTGAAA
AGGTAGGGAAGGGGATTTTC

Downstream 100 bases:

>100_bases
GAGGATCCATATGAAGCATGAAGTATCTCCTGTGTCATTAATGGGATTAGAAGAATTTGCAGGGAAGCGAAATGAAGCAA
GTAAAGCACATATTGATACC

Product: flagellar motor switch protein flim

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSGDKLSQEQIDALLKAVNEGEEMPAFAQEAGKQDKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPID
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDN
IFALLCKNLEQSFESVVAIKPTFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGFVDGKHKFNCFIGKDGTRKA
LLFKSFVE

Sequences:

>Translated_328_residues
MSGDKLSQEQIDALLKAVNEGEEMPAFAQEAGKQDKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPID
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDN
IFALLCKNLEQSFESVVAIKPTFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGFVDGKHKFNCFIGKDGTRKA
LLFKSFVE
>Mature_327_residues
SGDKLSQEQIDALLKAVNEGEEMPAFAQEAGKQDKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPIDL
EPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNI
FALLCKNLEQSFESVVAIKPTFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIVE
HSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGFVDGKHKFNCFIGKDGTRKAL
LFKSFVE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37258; Mature: 37127

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDKLSQEQIDALLKAVNEGEEMPAFAQEAGKQDKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHH
STFGKQTSQTLSARMRIPIDLEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHEECEEECCCCCHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEE
IEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNIFALLCKNLEQSFESVVAIK
EEEHHHHEEEEHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
PTFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLG
HCCCHHHHHCCHHHEEEHHHHCCCHHEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHH
FVDGKHKFNCFIGKDGTRKALLFKSFVE
HCCCCEEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGDKLSQEQIDALLKAVNEGEEMPAFAQEAGKQDKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHH
STFGKQTSQTLSARMRIPIDLEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHEECEEECCCCCHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEE
IEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNIFALLCKNLEQSFESVVAIK
EEEHHHHEEEEHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
PTFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLG
HCCCHHHHHCCHHHEEEHHHHCCCHHEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHH
FVDGKHKFNCFIGKDGTRKALLFKSFVE
HCCCCEEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]