Click here to switch to the map view.

The map label for this gene is flgD

Identifier: 222095376

GI number: 222095376

Start: 1687505

End: 1688083

Strand: Direct

Name: flgD

Synonym: BCQ_1716

Alternate gene names: NA

Gene position: 1687505-1688083 (Clockwise)

Preceding gene: 222095375

Following gene: 222095377

Centisome position: 32.36

GC content: 38.51

Gene sequence:

>579_bases
GTGCCAACAGTTGGATTAAATACAACGAGTACAAACCATATTCCATTACAAGCAGGAGCGCAGAATAGGAACGCATCTGT
TAACGGTGCACAACCGGCAGTAGGGCAAATGAATGGAGTATCAGCAGGAGAACAAAAGACTCCTGGTGTAATGGGGAAAG
ATGATTTTCTAAAATTATTTTTAGCGAGCTTTCAACATCAAGATCCATTTAATGCGATGGATATGAATCAAATGATGAAC
CAGACAGCACAATTATCTCTTATGGAACAAGTACAGAATATGACGAAAGCGGTAGATAAACTGCAATCAACGATGTATTC
AACAGCGCTTGATGGTGGAATGAAGTTTTTAGGAAAGTATGTAAGAGGTGTTGACGGTGATGGTAAAAAAGTCACTGGTC
AAGTAGAGACAGTTCGCCTCGCAGAAAATAATGAGGTACAGCTCGTTATTGATAATAAAGTTGTATCTCTTCGTTTCGTT
GAGAGAGTATCTGATAAACCAATTGGAGACACGAATCCAGAAGATACAAAGAAAGACGAGCAAAAAGTAACGGAAGAAGA
AAAAACTACAAATTCATAA

Upstream 100 bases:

>100_bases
GCAGCGAGAACAAGAGCAAAGGCAAAAACAAAAACTAGCAAGTACGAAACATGAAAAACAAGAATCAAAAGAATTTGCGG
GATTATTGGAGGAATAAAGC

Downstream 100 bases:

>100_bases
GGAGTGTCCATACGTTATGATTAAAGCGTTATATACAAGTATTACAGGAATGAATGCAACACAAAATGCATTAAGTGTAA
CTTCAAATAATATCGCCAAT

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; Flagellar Hook Assembly Protein Family Protein; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPTVGLNTTSTNHIPLQAGAQNRNASVNGAQPAVGQMNGVSAGEQKTPGVMGKDDFLKLFLASFQHQDPFNAMDMNQMMN
QTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVDGDGKKVTGQVETVRLAENNEVQLVIDNKVVSLRFV
ERVSDKPIGDTNPEDTKKDEQKVTEEEKTTNS

Sequences:

>Translated_192_residues
MPTVGLNTTSTNHIPLQAGAQNRNASVNGAQPAVGQMNGVSAGEQKTPGVMGKDDFLKLFLASFQHQDPFNAMDMNQMMN
QTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVDGDGKKVTGQVETVRLAENNEVQLVIDNKVVSLRFV
ERVSDKPIGDTNPEDTKKDEQKVTEEEKTTNS
>Mature_191_residues
PTVGLNTTSTNHIPLQAGAQNRNASVNGAQPAVGQMNGVSAGEQKTPGVMGKDDFLKLFLASFQHQDPFNAMDMNQMMNQ
TAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVDGDGKKVTGQVETVRLAENNEVQLVIDNKVVSLRFVE
RVSDKPIGDTNPEDTKKDEQKVTEEEKTTNS

Specific function: Unknown

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20955; Mature: 20824

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVGLNTTSTNHIPLQAGAQNRNASVNGAQPAVGQMNGVSAGEQKTPGVMGKDDFLKLF
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LASFQHQDPFNAMDMNQMMNQTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKY
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGVDGDGKKVTGQVETVRLAENNEVQLVIDNKVVSLRFVERVSDKPIGDTNPEDTKKDE
HHCCCCCCCEEECCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
QKVTEEEKTTNS
HHHHHHHHCCCC
>Mature Secondary Structure 
PTVGLNTTSTNHIPLQAGAQNRNASVNGAQPAVGQMNGVSAGEQKTPGVMGKDDFLKLF
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LASFQHQDPFNAMDMNQMMNQTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKY
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGVDGDGKKVTGQVETVRLAENNEVQLVIDNKVVSLRFVERVSDKPIGDTNPEDTKKDE
HHCCCCCCCEEECCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
QKVTEEEKTTNS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA