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The map label for this gene is fliD [H]

Identifier: 222095364

GI number: 222095364

Start: 1677665

End: 1679074

Strand: Direct

Name: fliD [H]

Synonym: BCQ_1704

Alternate gene names: 222095364

Gene position: 1677665-1679074 (Clockwise)

Preceding gene: 222095363

Following gene: 222095365

Centisome position: 32.17

GC content: 34.26

Gene sequence:

>1410_bases
ATGGCAGGAACGATAACAGGTATTGGCGGTAGACAACAGATTTGGAATCTCGGAAATAACATGATCGATACTTCTAACTT
CGTTGAATTAGAAATGAATGCGTTAGATATGAGAAAAACACCGTATACAACTGAAAAGAATAGCCTTTCACAAGATAAAC
TTTTATATACAAGTTTAAAATCGGAATTCAGTTCTTTCACGCAAACATTTAAAAATTTAGCGGCTTTTAAAGGGAATGAG
AAAAAGGTAACAACATCACAAGACGGTTATATTAATGTGAAAGCTGATGGTGGAGCTATTGCGGGAACTTTTAATATGAA
GATTACACAGCTTGCGCAGCGCCATCAAATAGCTTCTGATGAAATTAAAGATATAGATGCAAAGCTTAATAGAGATGAAA
CATTAAAACTAGGTGATAAAGAACTAAAAATAACATCTGATATGACATATAAGGATTTAATTAATAAAATTAATGATGGA
GATTATGGTGTATCAGCTTACACACTTGGAAATAAAATTTTTATGACCTCAAAAAAAGAAGGAAAAGATGGAGTAATTAA
TTTTGAGGGGAACACATCTAAATTTTTTCAAGATATAGGGTTAGCTAATGAGAAGGGTGCAGCGATCCATATAATCAATG
AAGCGCAAAATGCTGAATATACGATTAATGGTATTACAGGTAGCAGCTCCACCAATACAGTTGAAGCCCTTCCAGGTGTG
AAAATTGAATTATTAAAAGTAACTGAGCAAAAAGTAGAGGAAAAGCCAGTAGAAAATCCGGACGGAGAAAGTACAGAGGT
TGATCCAAAGACAACAGAGGCACAAGCAAAAGGGATAGAGCTGAAGTTTACAGTAAGTGACTCAAACGTAACAGACGCAT
CAAATGTTATTAAAAAAATGGTTGCGGATTATAATAAAGCTGTTTCTACAGTAGATATCTTTGCTGGTAAAGGCGGGGCG
TTCCAAGGTCAAGCTATTATGCAAAGTGTACGCCAAGCGATGAATAGCGTCGTAACATTTTCTCAAGATGGTAATTACTT
ATTCTCATTTGGTATTCAATTAAAGCAAGATGGAACGATGGAAGTTAATGATGAAGCATTAACGAAAGCGTTAAAAGAGA
AGCCGGATGCAGCGAAGCAATTTTTCTTTAGTTCTAACGGATTAGGGAAAATGATGGAAGAACCACTTGAAAAATTATTT
GGTGATAAAGGTGTAGTAGGAGAACGAGTAAAAAGTATTGATTCACGTGTAAGTGATTTAGATAAAAAGATTAAAGATAT
TGAAGCACAAAACTTGCAAAAACAAGATGAAATTGTGAAGAAGTATCAAAAGCTAGAAAGTACATTAGCGGCGCTAGATA
GCCAATTAAAAACAATTAAAGCAATGACAAAACAAAAAAGTGATGATTAA

Upstream 100 bases:

>100_bases
GCGTATATTAACGCGACGTATGAAGCGACGCTTAAAGCGGTTAGCACGATGAGTAAAACGAGTATTTTAGACTACATGTA
AAGAATAAGGAGTGAGAAAT

Downstream 100 bases:

>100_bases
TGAAAGTTGAGGAAGTGATCGTATGCAAGCATGGCAACGTTATATGCAAAATGATATTATGACGAGTAATCCGATTAAAA
ATACAATTTTTATTTATGAA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTSQDGYINVKADGGAIAGTFNMKITQLAQRHQIASDEIKDIDAKLNRDETLKLGDKELKITSDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGKDGVINFEGNTSKFFQDIGLANEKGAAIHIINEAQNAEYTINGITGSSSTNTVEALPGV
KIELLKVTEQKVEEKPVENPDGESTEVDPKTTEAQAKGIELKFTVSDSNVTDASNVIKKMVADYNKAVSTVDIFAGKGGA
FQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLEKLF
GDKGVVGERVKSIDSRVSDLDKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Sequences:

>Translated_469_residues
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTSQDGYINVKADGGAIAGTFNMKITQLAQRHQIASDEIKDIDAKLNRDETLKLGDKELKITSDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGKDGVINFEGNTSKFFQDIGLANEKGAAIHIINEAQNAEYTINGITGSSSTNTVEALPGV
KIELLKVTEQKVEEKPVENPDGESTEVDPKTTEAQAKGIELKFTVSDSNVTDASNVIKKMVADYNKAVSTVDIFAGKGGA
FQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLEKLF
GDKGVVGERVKSIDSRVSDLDKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
>Mature_468_residues
AGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK
KVTTSQDGYINVKADGGAIAGTFNMKITQLAQRHQIASDEIKDIDAKLNRDETLKLGDKELKITSDMTYKDLINKINDGD
YGVSAYTLGNKIFMTSKKEGKDGVINFEGNTSKFFQDIGLANEKGAAIHIINEAQNAEYTINGITGSSSTNTVEALPGVK
IELLKVTEQKVEEKPVENPDGESTEVDPKTTEAQAKGIELKFTVSDSNVTDASNVIKKMVADYNKAVSTVDIFAGKGGAF
QGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLEKLFG
DKGVVGERVKSIDSRVSDLDKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 51546; Mature: 51414

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLK
CCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYINVKADGGAIAGTFNMKITQLAQRHQIASD
HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHH
EIKDIDAKLNRDETLKLGDKELKITSDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GKDGVINFEGNTSKFFQDIGLANEKGAAIHIINEAQNAEYTINGITGSSSTNTVEALPGV
CCCCEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEECCCCC
KIELLKVTEQKVEEKPVENPDGESTEVDPKTTEAQAKGIELKFTVSDSNVTDASNVIKKM
EEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHH
VADYNKAVSTVDIFAGKGGAFQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTM
HHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCE
EVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLEKLFGDKGVVGERVKSIDSRVSDL
EECHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLK
CCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYINVKADGGAIAGTFNMKITQLAQRHQIASD
HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHH
EIKDIDAKLNRDETLKLGDKELKITSDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GKDGVINFEGNTSKFFQDIGLANEKGAAIHIINEAQNAEYTINGITGSSSTNTVEALPGV
CCCCEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEECCCCC
KIELLKVTEQKVEEKPVENPDGESTEVDPKTTEAQAKGIELKFTVSDSNVTDASNVIKKM
EEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHH
VADYNKAVSTVDIFAGKGGAFQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTM
HHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCE
EVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLEKLFGDKGVVGERVKSIDSRVSDL
EECHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]