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The map label for this gene is fni [H]

Identifier: 222095229

GI number: 222095229

Start: 1541881

End: 1542930

Strand: Direct

Name: fni [H]

Synonym: BCQ_1569

Alternate gene names: 222095229

Gene position: 1541881-1542930 (Clockwise)

Preceding gene: 222095228

Following gene: 222095230

Centisome position: 29.57

GC content: 38.76

Gene sequence:

>1050_bases
GTGGTAAGGGCAAAACGTAAATTAGATCATATTGAATACGCTCTTTCTACTGGTCAGTCTCGTACGCATGGCTTTCATGA
TATTGATTTTGTGCATCAAAGCTTGCCAAATTCAAATTATGACACAATAACATGTGAAACAAAAATCGGCGAACTTTCAC
TAAGTTCGCCGATTTTTATCAATGCGATGACTGGTGGTGGAGGAGAGAAAACGTTACATATTAATGAGCAATTAGCATAT
GTAGCGAAACATCATAACCTTGCTATGGCTGTAGGATCGCAAATGGCAGCGTTAAAAGATGAAAGTGAGGCTGCTTCTTA
TAAGATTATTAGAAAGGTAAATCCAAATGGTATTTTCTTTGCTAATTTAGGTAGTGAGGCAACTGTTGAACAGGCAGAGC
GTGCTGTTGATATGGTTGAAGCGAATGCATTGCAAATTCATTTAAATGTCATACAAGAGTTAACGATGCCAGAAGGAGAC
CGTGACTTTACTGGTGTACTTCAGCGTATTGAGAAAATTGTTTTAAATAGTAAAGTTCCTGTCATTGTAAAAGAAGTTGG
ATTTGGGATGAGTAAGGAAACAATGCAACAGTTAGCGAGCGTAGGTGTAACGGCAATTGATATTGGCGGACAAGGTGGTA
CGAATTTTGCTGCTGTTGAAAATGAAAGAAGACAGCGAATGCTTTCTTATTTTAATAACTGGGGCATACAAACAGCTACC
TCGATTATTGAAGCAACCTCTACAAATAATAACCTCTCTTTTATTGCATCTGGGGGTATACAAACAGCGCTTGACGTAGC
GAAAGCAATCGCATTAGGGGCGAATACAACTGCTTTTGCTGGATACTTTTTACGCATTTTAATGCAAGATGGCATCGAGA
AGTTAGTGGATGAAATTGATCTATTACATGCAGACTTGAAATTTATTATGACAGCTCTTGGCGCGAAGACGATAGAAGAG
TTACAGTCTGTTCCTCTTGTTGTAAAGGGCGAAACGTATCATTGGTTAACGCAGCGTGGAATTGATACGACGCATTATAG
TAGAAGATAA

Upstream 100 bases:

>100_bases
TTATAGTCAGTATGAACCGAATGCTGATTCTGCTACTTTCCAATTAAGTGACATTATTGGTGAACAACTGAAAAAATTAA
AAAAATAAAGAGGGGTACAA

Downstream 100 bases:

>100_bases
AAAATCAACCGTTTGGTTGATTTTTTTGTGTTCTATTCGTTTTAGTAATATAAGGCGAGGGATATAATTAATATTCTATA
AAAATAAAATTATCTATATA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATVEQAERAVDMVEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLVDEIDLLHADLKFIMTALGAKTIEE
LQSVPLVVKGETYHWLTQRGIDTTHYSRR

Sequences:

>Translated_349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATVEQAERAVDMVEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLVDEIDLLHADLKFIMTALGAKTIEE
LQSVPLVVKGETYHWLTQRGIDTTHYSRR
>Mature_349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATVEQAERAVDMVEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLVDEIDLLHADLKFIMTALGAKTIEE
LQSVPLVVKGETYHWLTQRGIDTTHYSRR

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 38212; Mature: 38212

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFI
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEECCCCEEE
NAMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFF
EEEECCCCCEEEEECHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHEEEEEEECCCEEEE
ANLGSEATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSKVP
EECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
VIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
EEEHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLVDEID
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLHADLKFIMTALGAKTIEELQSVPLVVKGETYHWLTQRGIDTTHYSRR
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCEEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSNYDTITCETKIGELSLSSPIFI
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEECCCCEEE
NAMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFF
EEEECCCCCEEEEECHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHEEEEEEECCCEEEE
ANLGSEATVEQAERAVDMVEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSKVP
EECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
VIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
EEEHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMQDGIEKLVDEID
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLHADLKFIMTALGAKTIEELQSVPLVVKGETYHWLTQRGIDTTHYSRR
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA