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The map label for this gene is yebA [C]

Identifier: 222095209

GI number: 222095209

Start: 1525177

End: 1525791

Strand: Direct

Name: yebA [C]

Synonym: BCQ_1549

Alternate gene names: 222095209

Gene position: 1525177-1525791 (Clockwise)

Preceding gene: 222095208

Following gene: 222095211

Centisome position: 29.25

GC content: 36.42

Gene sequence:

>615_bases
ATGAAAGCTTTAAAATACGGCGTCATGTTATTGACAGTACTGTTTTTATCTCAATTACATGTGTACGCAGAGGGAAATCA
ATGGGCATGGCCTGTTGAAGGACAGATAAGTGATTATTTTGGAACAAGGCACGGAAAACACTACGGTATAGATATAGCGG
CACCGATCGGCACGCCTGTGTCAGCTATTCAAGAAGGGAAGGTAACAAAGTCTTATTATTCAAGTAGTTATGGAAACGTT
ATATTTATTAAACATGGAGAATATGAGGCTGTGTATGCACATTTAAATAAGAGATATGTAGTTCAAGGAGATTATATTTC
AAAGGGAGAAATAATTGGAGAAGTAGGAAATACAGGAGAATCCCGAGGTGCACACTTACATTTAGAAGTTCATCAAGGAA
AATGGACGATGGCAAAAAAGAATGCGATGAATCCATTGCTTGTTTTACATGAACAAAGAAATGAAACAGTTTCTTCATCG
TTATACGTCGTCCAAAAAGGCGACACTCTAGTTAGCATTGCGCGGAAATTTAGAATGTCCGTTAAGGAAATTCAAGAAAA
AAATGGATTGCAACAAGAGCTCATTTATCCAAATCAACAATTATATGTAAAGTAA

Upstream 100 bases:

>100_bases
GAAGGAAGTGGAGTGATTCACTTTCTTTTTTTGTATACTTTTTTCTGTAATATACCAAAATAGAGAAGGTATGGTCGTAA
TTAGAAAACGGAGGATGTAT

Downstream 100 bases:

>100_bases
AAAAAGAGCTAGTTTAACTAGCTCTTTTTTACCAAAAAATAAAGACACATATAAATCCAGAAATAGCTAAGTAGCTATAT
AAGTAAAATACTTTCGCTCT

Product: cell wall endopeptidase, family m23/m37

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKALKYGVMLLTVLFLSQLHVYAEGNQWAWPVEGQISDYFGTRHGKHYGIDIAAPIGTPVSAIQEGKVTKSYYSSSYGNV
IFIKHGEYEAVYAHLNKRYVVQGDYISKGEIIGEVGNTGESRGAHLHLEVHQGKWTMAKKNAMNPLLVLHEQRNETVSSS
LYVVQKGDTLVSIARKFRMSVKEIQEKNGLQQELIYPNQQLYVK

Sequences:

>Translated_204_residues
MKALKYGVMLLTVLFLSQLHVYAEGNQWAWPVEGQISDYFGTRHGKHYGIDIAAPIGTPVSAIQEGKVTKSYYSSSYGNV
IFIKHGEYEAVYAHLNKRYVVQGDYISKGEIIGEVGNTGESRGAHLHLEVHQGKWTMAKKNAMNPLLVLHEQRNETVSSS
LYVVQKGDTLVSIARKFRMSVKEIQEKNGLQQELIYPNQQLYVK
>Mature_204_residues
MKALKYGVMLLTVLFLSQLHVYAEGNQWAWPVEGQISDYFGTRHGKHYGIDIAAPIGTPVSAIQEGKVTKSYYSSSYGNV
IFIKHGEYEAVYAHLNKRYVVQGDYISKGEIIGEVGNTGESRGAHLHLEVHQGKWTMAKKNAMNPLLVLHEQRNETVSSS
LYVVQKGDTLVSIARKFRMSVKEIQEKNGLQQELIYPNQQLYVK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=117, Percent_Identity=37.6068376068376, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082174, Length=129, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1789099, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 23018; Mature: 23018

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALKYGVMLLTVLFLSQLHVYAEGNQWAWPVEGQISDYFGTRHGKHYGIDIAAPIGTPV
CCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCHHHHHCCCCCCEECEEEECCCCCCH
SAIQEGKVTKSYYSSSYGNVIFIKHGEYEAVYAHLNKRYVVQGDYISKGEIIGEVGNTGE
HHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCEEECCCCCCC
SRGAHLHLEVHQGKWTMAKKNAMNPLLVLHEQRNETVSSSLYVVQKGDTLVSIARKFRMS
CCCCEEEEEEECCEEEEEHHCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH
VKEIQEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC
>Mature Secondary Structure
MKALKYGVMLLTVLFLSQLHVYAEGNQWAWPVEGQISDYFGTRHGKHYGIDIAAPIGTPV
CCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCHHHHHCCCCCCEECEEEECCCCCCH
SAIQEGKVTKSYYSSSYGNVIFIKHGEYEAVYAHLNKRYVVQGDYISKGEIIGEVGNTGE
HHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCEEECCCCCCC
SRGAHLHLEVHQGKWTMAKKNAMNPLLVLHEQRNETVSSSLYVVQKGDTLVSIARKFRMS
CCCCEEEEEEECCEEEEEHHCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH
VKEIQEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]