| Definition | Bacillus cereus Q1 chromosome, complete genome. |
|---|---|
| Accession | NC_011969 |
| Length | 5,214,195 |
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The map label for this gene is yhdH [H]
Identifier: 222095162
GI number: 222095162
Start: 1474733
End: 1476088
Strand: Direct
Name: yhdH [H]
Synonym: BCQ_1502
Alternate gene names: 222095162
Gene position: 1474733-1476088 (Clockwise)
Preceding gene: 222095161
Following gene: 222095165
Centisome position: 28.28
GC content: 36.58
Gene sequence:
>1356_bases ATGAAAGAAACACAGCAATGGACGTCGAAAATAGGCTTTGTACTCGCAGCAGCCGGAGCCGCAGTAGGTCTTGGTGCAAT ATGGAAATTTCCATATGTTGCAGGTAATGGCGGGGGAGGCGCATTCTTCCTTGTATTTTTACTATTAACTTTATTTATAG GTATGCCACTCCTCTTAGCTGAATTTGTTATTGGACGTAGTACGCAAAAAGAGGCAGTTACAGCGTATAAAGTATTGGTG CCAAATAGCAAGTTATATCCTTGGATTGGTCGTATGGGAGTTGTTACTTGTTTTAGTGTACTATCTTTTTATAGTGTTGT AGGTGGATGGATTTTACTTTACTTATACTATAGTGTGACAGGAAGTTTCTGGAATGGAGTGACTGATTATGGGCAATTAT TCGGTGAGACGATTTCAAATCCAGTAAGCGCGATTGGAGCGCAATTTGTCTTTATGCTTTGTACGATTTTTGTTGTAAGT AAAGGTGTAGAGAAAGGGATAGAAAAAGCAAGTAAGTATATGATGCCGCTATTATTTATTTTGTTTATTGCAATTATTGT TCGTGCGTTAACACTGGATGGTGCTTTTGCTGGGGTAGAGTTCTTCTTAAAACCAGATTTTTCAAAGCTGACAGCAGATA CGATTTTATACGCGATGGGACAATCATTCTTCTCGCTAACAGTTGGGGCCTCGGTAATGGTCACGTATAGTTCTTATTTG AAGAAAGAAGAACATTTAGCAAAATCAGCAACATCTATTGTAAGTTTAACTGTTTTTATTACAGTACTTGCAGGATTAGC GATTTTTCCAGCGATTTTCGCATTAGGTGTTAAGCCGACTGAAGGACCGGGGTTACTATTTATCGTCCTTCCAGCGGTAT TTGCGAAAATACCATTTGGACAATTTTTCTTCATTATGTTTTTGGTGTTATTCTTCTTTGCAACGCTAACATCTGCGATT TCCATGCTTGAAATTGTAGTAGCATCTGTTGCGAAAGATAATGAGAAAAAGCGTCCGTCAGCATCATTATTAATTGGTAT TCTAATTTTTGCGGTTGGAATTCCGTCAGCATTATCGTTTGGTATTATGAGTGATGTGAAAATATTTGGGAAAACATTCT TTGACTTAGTCGACTTCTCAGTAAGTAACGTATTGCTGCCGTTAGGGGTACTAGCTATTTCGCTATTCGTACCAAATAAA ATGAGTAAAGAAATGTTAATGAAAGAATTAGAAGTTACGGAAACGAAAGGGAAAACATTATTTAATATTTGGTTCTTCTT ACTTCGTTATGTTATTCCAGTAACTGTAATTATTGTATTTTTAAATGTGATAGGTGTATTTAAAATGTTTGCATAA
Upstream 100 bases:
>100_bases CGTGTAGGGGACTTTTTTATTTTCTAAAGGAGGTGTGCGAGTATGAAATGAAAGTGTATAATTAATAAAAGTTTAAATAT TCAGAAAAGGGGAATTTATG
Downstream 100 bases:
>100_bases TAAAAAGACGGAGAAATCTCCGTCTTTTTATTATGTTGTAGGTGTATTTAGTAAGCGATTATATGCTTTGTAGGCTGTGA TGACTGCGAGGAATGATCCG
Product: sodium-dependent transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVLV PNSKLYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVTDYGQLFGETISNPVSAIGAQFVFMLCTIFVVS KGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTILYAMGQSFFSLTVGASVMVTYSSYL KKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSAI SMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPNK MSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNVIGVFKMFA
Sequences:
>Translated_451_residues MKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVLV PNSKLYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVTDYGQLFGETISNPVSAIGAQFVFMLCTIFVVS KGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTILYAMGQSFFSLTVGASVMVTYSSYL KKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSAI SMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPNK MSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNVIGVFKMFA >Mature_451_residues MKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVLV PNSKLYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVTDYGQLFGETISNPVSAIGAQFVFMLCTIFVVS KGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTILYAMGQSFFSLTVGASVMVTYSSYL KKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSAI SMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPNK MSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNVIGVFKMFA
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI171184408, Length=402, Percent_Identity=27.8606965174129, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI171184406, Length=402, Percent_Identity=27.8606965174129, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI171184404, Length=402, Percent_Identity=27.8606965174129, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4507043, Length=379, Percent_Identity=27.9683377308707, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI21361581, Length=406, Percent_Identity=26.3546798029557, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI289191377, Length=387, Percent_Identity=26.8733850129199, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI289191351, Length=387, Percent_Identity=26.8733850129199, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI4557046, Length=387, Percent_Identity=26.8733850129199, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI7657587, Length=380, Percent_Identity=25, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4507041, Length=389, Percent_Identity=25.9640102827763, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI92859670, Length=448, Percent_Identity=24.1071428571429, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI134304856, Length=401, Percent_Identity=26.9326683291771, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI197276623, Length=351, Percent_Identity=25.0712250712251, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI54607094, Length=351, Percent_Identity=25.0712250712251, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI188528618, Length=385, Percent_Identity=22.3376623376623, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI51468073, Length=296, Percent_Identity=28.3783783783784, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI33354281, Length=298, Percent_Identity=27.5167785234899, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI58219014, Length=300, Percent_Identity=27, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI67782317, Length=424, Percent_Identity=24.0566037735849, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI67782313, Length=424, Percent_Identity=24.0566037735849, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI67782315, Length=424, Percent_Identity=24.0566037735849, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI194018524, Length=296, Percent_Identity=27.3648648648649, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI11181770, Length=291, Percent_Identity=25.7731958762887, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI21361693, Length=117, Percent_Identity=36.7521367521368, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI5032097, Length=351, Percent_Identity=24.7863247863248, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI218563756, Length=343, Percent_Identity=25.3644314868805, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI197276625, Length=116, Percent_Identity=35.3448275862069, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI12408638, Length=266, Percent_Identity=24.812030075188, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI289191353, Length=286, Percent_Identity=25.8741258741259, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI55749589, Length=115, Percent_Identity=29.5652173913043, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146584, Length=412, Percent_Identity=25.2427184466019, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17554804, Length=465, Percent_Identity=24.5161290322581, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71995588, Length=416, Percent_Identity=23.3173076923077, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI133952791, Length=183, Percent_Identity=27.8688524590164, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17555248, Length=114, Percent_Identity=38.5964912280702, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534083, Length=435, Percent_Identity=21.8390804597701, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17569475, Length=413, Percent_Identity=21.3075060532688, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17542050, Length=143, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI17136952, Length=437, Percent_Identity=26.3157894736842, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI281364394, Length=376, Percent_Identity=27.1276595744681, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI28574704, Length=376, Percent_Identity=27.1276595744681, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI17136950, Length=376, Percent_Identity=27.1276595744681, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI28574702, Length=376, Percent_Identity=27.1276595744681, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24762620, Length=413, Percent_Identity=26.8765133171913, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI19921936, Length=400, Percent_Identity=26.5, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI281365034, Length=414, Percent_Identity=25.6038647342995, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24652942, Length=425, Percent_Identity=25.8823529411765, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI45551088, Length=425, Percent_Identity=25.8823529411765, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI45551183, Length=401, Percent_Identity=24.1895261845387, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI45550877, Length=401, Percent_Identity=23.9401496259352, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24661428, Length=383, Percent_Identity=26.3707571801567, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24582567, Length=397, Percent_Identity=25.4408060453401, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281363702, Length=378, Percent_Identity=25.9259259259259, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24639514, Length=507, Percent_Identity=23.8658777120316, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI221329674, Length=507, Percent_Identity=24.0631163708087, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI281364136, Length=402, Percent_Identity=25.1243781094527, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI281363700, Length=337, Percent_Identity=27.0029673590504, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI24639516, Length=301, Percent_Identity=27.5747508305648, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24655079, Length=297, Percent_Identity=26.2626262626263, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24654186, Length=232, Percent_Identity=31.4655172413793, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI19921352, Length=219, Percent_Identity=28.7671232876712, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24584353, Length=219, Percent_Identity=28.7671232876712, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24639853, Length=515, Percent_Identity=21.747572815534, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582569, Length=358, Percent_Identity=23.7430167597765, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 49204; Mature: 49204
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH EFVIGRSTQKEAVTAYKVLVPNSKLYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVT HHHHCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSFWNGVTDYGQLFGETISNPVSAIGAQFVFMLCTIFVVSKGVEKGIEKASKYMMPLLFI HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTILYAMGQSFFSLTVGASVMVTYSSYL HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCH QFFFIMFLVLFFFATLTSAISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHH GIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPNKMSKEMLMKELEVTETKGKTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH FNIWFFLLRYVIPVTVIIVFLNVIGVFKMFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH EFVIGRSTQKEAVTAYKVLVPNSKLYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVT HHHHCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSFWNGVTDYGQLFGETISNPVSAIGAQFVFMLCTIFVVSKGVEKGIEKASKYMMPLLFI HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTILYAMGQSFFSLTVGASVMVTYSSYL HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCH QFFFIMFLVLFFFATLTSAISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHH GIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPNKMSKEMLMKELEVTETKGKTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH FNIWFFLLRYVIPVTVIIVFLNVIGVFKMFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]