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The map label for this gene is smc

Identifier: 222094677

GI number: 222094677

Start: 1011449

End: 1012831

Strand: Direct

Name: smc

Synonym: BCQ_1015

Alternate gene names: NA

Gene position: 1011449-1012831 (Clockwise)

Preceding gene: 222094676

Following gene: 222094678

Centisome position: 19.4

GC content: 33.33

Gene sequence:

>1383_bases
ATGAAAAAACTATTTGAATGCATTCCGGAAAATTATTTCAATTTGTTTGCTGGGAAAAATCGGGGGTTTTATGCTGAAGT
TGCTTTTTTACTATATGAACAATTCCATATCAATCGAGCTGGTATTTTATACAGTTTGATGAAAGATGAGGTTCAAGAAT
TAATAGAAACGAAAGAAGAGTTAGGAGAATGTATTGATATAGAAGATGAAATAGAAGAAAAAGAGCAAGACAGTGCTGGG
AGAGCAAATGAGGTGCTTCGACGTTTAAAGAAACTTAAATGGATTGATGTAGAAGTACGTGATCAATTTGAAGAGTTTAT
AGTGCTTCCAGTGTATTCTAGCCGTATTTTGGCTGTGCTAAAGGAAATTTGTGAAAATAGAACAATTGAATATCAAAGAT
ATTGTTTTACGACATATCAATTATTAACAGGAGTGGAGGCGGAGGAGCGCCCAGCTTCAGCTATTTTGGAGTCTGAAAAA
TATAGTGAGCAACTTTATGATGAATTAACAATTTTACTGCACAATATGAAAAATCATATGGAAACAATTGCAGCTAAAGA
TGATATACAACAAGTGTTAGAGCATCATTTTGGAGAATATAAAAAAGATATAATTGATAAAAGTTACCATCGTTTAAGGA
CATCGGATCATGTGTCGAGATATCGAAATAAAATATTGGAGCGTATACAGACTTGGTTTTTAGATGATAAATTCATGAAA
CGTGCTGCCGAAGATGCTGTAGAAAGTGGATATTCTGCTAACTGGGAAGAAGCAATGGATGGATTAAGTAAGAAAATGTA
TAGGGTTGAAGAAATTTATAGTAATTTAGATGAAATTTGTAATCAAATTGATGCACGCCATTATCAATATTTACGAGCAG
TTTTAGATCGTTCTAGATATTTAAGTACTTATAATGACAGTATCAATTACAAAATATCTTATATTTTAGAACATATAGGG
CAAATGGACGAGAATATACTCGATTCTTCTCTGTTTCGTTTAGTACAGTTGCGGCAACTTCAAGAAGCGTCACTGTTATC
CCCACGTAAGAAAAAAGGTGTATATGAACCAGAACAGCATGAGGTTAATGAAATTAGTGATGAGATGCGAGAGGAGCTAA
AGGCTGAAAATATAAGACGTATGGAAAAGGTTATGAATCGAAAGAAAATCCAAAAATTTGTGTTAGAAGCAATGAAGGGG
CGTCAAGAGATAGAGATGAGTGAATTGAATTTGCAAAATGAGGATGACGCTTTGTATTTAATTTACGTTTATTTGTATGG
TTATAGTAAGGGAACTGGATACAAGCTTAGTGAAGAGCCACCTGAATTTATTACACAAAAGGGGTATACATTTTCTAATC
GTACGATAAAACGAGAAAATTAG

Upstream 100 bases:

>100_bases
GCAGGGGAATTAAAACGTAATATAGAAATTTATAATTATAATTATAGAGTTAAATGATGGTGCTTAATGGAAGACGATGA
TAGCGAAAAAGGAGGCTGAA

Downstream 100 bases:

>100_bases
GGGGAAGTTATGCAAAATGTATCGGAAAGAGAAAGAGAAGAGATGGGGATTGTTGTTAATTATTTATTCTCCCATAATTT
TTTATTGAAAGAATTTGAAC

Product: chromosome segregation smc protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKKLFECIPENYFNLFAGKNRGFYAEVAFLLYEQFHINRAGILYSLMKDEVQELIETKEELGECIDIEDEIEEKEQDSAG
RANEVLRRLKKLKWIDVEVRDQFEEFIVLPVYSSRILAVLKEICENRTIEYQRYCFTTYQLLTGVEAEERPASAILESEK
YSEQLYDELTILLHNMKNHMETIAAKDDIQQVLEHHFGEYKKDIIDKSYHRLRTSDHVSRYRNKILERIQTWFLDDKFMK
RAAEDAVESGYSANWEEAMDGLSKKMYRVEEIYSNLDEICNQIDARHYQYLRAVLDRSRYLSTYNDSINYKISYILEHIG
QMDENILDSSLFRLVQLRQLQEASLLSPRKKKGVYEPEQHEVNEISDEMREELKAENIRRMEKVMNRKKIQKFVLEAMKG
RQEIEMSELNLQNEDDALYLIYVYLYGYSKGTGYKLSEEPPEFITQKGYTFSNRTIKREN

Sequences:

>Translated_460_residues
MKKLFECIPENYFNLFAGKNRGFYAEVAFLLYEQFHINRAGILYSLMKDEVQELIETKEELGECIDIEDEIEEKEQDSAG
RANEVLRRLKKLKWIDVEVRDQFEEFIVLPVYSSRILAVLKEICENRTIEYQRYCFTTYQLLTGVEAEERPASAILESEK
YSEQLYDELTILLHNMKNHMETIAAKDDIQQVLEHHFGEYKKDIIDKSYHRLRTSDHVSRYRNKILERIQTWFLDDKFMK
RAAEDAVESGYSANWEEAMDGLSKKMYRVEEIYSNLDEICNQIDARHYQYLRAVLDRSRYLSTYNDSINYKISYILEHIG
QMDENILDSSLFRLVQLRQLQEASLLSPRKKKGVYEPEQHEVNEISDEMREELKAENIRRMEKVMNRKKIQKFVLEAMKG
RQEIEMSELNLQNEDDALYLIYVYLYGYSKGTGYKLSEEPPEFITQKGYTFSNRTIKREN
>Mature_460_residues
MKKLFECIPENYFNLFAGKNRGFYAEVAFLLYEQFHINRAGILYSLMKDEVQELIETKEELGECIDIEDEIEEKEQDSAG
RANEVLRRLKKLKWIDVEVRDQFEEFIVLPVYSSRILAVLKEICENRTIEYQRYCFTTYQLLTGVEAEERPASAILESEK
YSEQLYDELTILLHNMKNHMETIAAKDDIQQVLEHHFGEYKKDIIDKSYHRLRTSDHVSRYRNKILERIQTWFLDDKFMK
RAAEDAVESGYSANWEEAMDGLSKKMYRVEEIYSNLDEICNQIDARHYQYLRAVLDRSRYLSTYNDSINYKISYILEHIG
QMDENILDSSLFRLVQLRQLQEASLLSPRKKKGVYEPEQHEVNEISDEMREELKAENIRRMEKVMNRKKIQKFVLEAMKG
RQEIEMSELNLQNEDDALYLIYVYLYGYSKGTGYKLSEEPPEFITQKGYTFSNRTIKREN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54845; Mature: 54845

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFECIPENYFNLFAGKNRGFYAEVAFLLYEQFHINRAGILYSLMKDEVQELIETKEE
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LGECIDIEDEIEEKEQDSAGRANEVLRRLKKLKWIDVEVRDQFEEFIVLPVYSSRILAVL
HHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEHHHHHHHHHHH
KEICENRTIEYQRYCFTTYQLLTGVEAEERPASAILESEKYSEQLYDELTILLHNMKNHM
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIAAKDDIQQVLEHHFGEYKKDIIDKSYHRLRTSDHVSRYRNKILERIQTWFLDDKFMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RAAEDAVESGYSANWEEAMDGLSKKMYRVEEIYSNLDEICNQIDARHYQYLRAVLDRSRY
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTYNDSINYKISYILEHIGQMDENILDSSLFRLVQLRQLQEASLLSPRKKKGVYEPEQH
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHH
EVNEISDEMREELKAENIRRMEKVMNRKKIQKFVLEAMKGRQEIEMSELNLQNEDDALYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE
IYVYLYGYSKGTGYKLSEEPPEFITQKGYTFSNRTIKREN
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCC
>Mature Secondary Structure
MKKLFECIPENYFNLFAGKNRGFYAEVAFLLYEQFHINRAGILYSLMKDEVQELIETKEE
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LGECIDIEDEIEEKEQDSAGRANEVLRRLKKLKWIDVEVRDQFEEFIVLPVYSSRILAVL
HHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEHHHHHHHHHHH
KEICENRTIEYQRYCFTTYQLLTGVEAEERPASAILESEKYSEQLYDELTILLHNMKNHM
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIAAKDDIQQVLEHHFGEYKKDIIDKSYHRLRTSDHVSRYRNKILERIQTWFLDDKFMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RAAEDAVESGYSANWEEAMDGLSKKMYRVEEIYSNLDEICNQIDARHYQYLRAVLDRSRY
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTYNDSINYKISYILEHIGQMDENILDSSLFRLVQLRQLQEASLLSPRKKKGVYEPEQH
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHH
EVNEISDEMREELKAENIRRMEKVMNRKKIQKFVLEAMKGRQEIEMSELNLQNEDDALYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE
IYVYLYGYSKGTGYKLSEEPPEFITQKGYTFSNRTIKREN
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA