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The map label for this gene is oppA [H]

Identifier: 222094587

GI number: 222094587

Start: 901875

End: 903614

Strand: Reverse

Name: oppA [H]

Synonym: BCQ_0925

Alternate gene names: 222094587

Gene position: 903614-901875 (Counterclockwise)

Preceding gene: 222094589

Following gene: 222094584

Centisome position: 17.33

GC content: 33.79

Gene sequence:

>1740_bases
ATGAAAATTATGGACTATTACATTAGACTAAGACTACATGCACAAGATCAACAACATATGCGAAATAGCTTACAAGAATT
AGCAGATGTTTTATATTGCAGTACGAAAAACGTAAAGATTTTATTAAAGAAAATGAGTGAGGAACAATTAATTAGCTGGA
CTCCAGGGCGAGGACGCGGAAATAAAACAGAAATTCTATTTATACATAATTTCGTAGAAGCGATTGAGTCCTATACAGAT
GAACTGTTAGCGCAAGAAAAATTAAAAGATATCTTTCTTCTTTTAAAAGAACCCCTACCCCTTGCACTTCAAAAAAAGAT
AGAAAATAAACTACATCATCATTTTGGATACGAACCTTCAAATGATATGTACGACATATTAAAAATTCCTATATCGAGAA
AGATATTCCCCTTAGATCCGGCTTTTGTGGCTGTAACTACAGAGAGCCATCTTACGAATCAAATTTTTGATACGTTAGTC
GTTTATAACGATGTTACGGAAAAAATGGAACCACACATTGCGCATACGTGGGAATTAAGTGAAGACGGGCTGACGTGGAC
TTTTTATTTACGAAAGGACATTCATTTTCATAACGAAACAGTTTTAACTTCTAAAGATGTACAATTTTCATTTGAAAGAC
TAAAGGAAGTTCACTCTCCTTTCGAATGGTTAACAGCAGAAATTGTTCAAATTGAAACACCATCACCACTGCAAATTCGA
TTTCATTTAGCAAAACCAAATTTATTTTTCTTACACTATGTAAGTTCCATACAACTAGCAATTTTGCCGCGTGATGCAGT
TATTCAAAATCACCATTATATAGGTACTGGACCTTTCAAACTTTCTCATTACTCTGAAGATAATATCGTACTCGAAGCAT
TCTCTCATTATTTTAAAGAGCGCGCTTTATTAGACCGTATTGAATTTTGGAGTATTCCTGATCATGTGCAAATCGATGCT
GATTATGAACTACCAAATGAAGAAGAAAATGAAAGGCATGATATACAAATAGAAGAAATAGGTTGTATTTATGCTGGCTT
CAACTTTACAAAACCTGGTCCCCATCACGACATTTACTTTCGAAAGGCTTGGAGAGAACTATATGATGTTGAAACGATAC
TTCGTAGCATAGAGGGTAGACGAACAATTGCTGCATCAAGCTTTTTCCCTGAAAGAAGTCGCCAAGCTTCTAAAAGGTCT
TACTCTTTAGAAAAAGCGAAAGAGTATTTAAAAAAGAGCACTTATAACGGAGAGACGATACATATTTACTTCTTCGCATT
TAAAGATAGTGCAAATGATGCATATTTCTTAAAAGAACGATGTGAAAGTTTAGGTATACAAGTAGAGCTTCACCCATTTC
TCGTTTCAGATTATATGAACCGTTCTATCGATCAACATGCCGATATTATTTTCATGGGAGAAGTGTTTGCTGCCGATCAT
GAACTTGCATTTTTAAATGTATTTAAAAATAAAAGTTGCTTTGTAAACCGGTTCATGGACCCGCACTATGAAAAACAAAT
TAACTGTTTGTTAGATACATTTTTATTAGAAGAAAATAAAGAAAAGCGCTACGAGCTCATGTATGAGATCGAAGAATTTT
TACAAACAGAACACATCATTTTATTTAACTATCACGTTTTAAAAAGAAAGACATACCCTTCTTCTTTAAAAAACCTAACA
ATTGATTCATTCGGTTGGGCAAATTTTGCGAAGTTATGGATACAGTCATCCATGTCTTAA

Upstream 100 bases:

>100_bases
CCCCCTCCTTACGCTTACTTATTTTACTTTGAAAAAAAGGAAGAAAAAGGTTAGAATATTCTAAAGAGTTTCCCCTTTTA
TGATAGAAGGAAGTGTATAT

Downstream 100 bases:

>100_bases
AATGCGATTCATTATAAAAGGAGAAGGTACTACATCCATAGTAGTACCTTCTTCACATACAAATATAAACTATTATTTAA
TTACTTCATCTAAGTGATCT

Product: peptide ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTNQIFDTLV
VYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDIHFHNETVLTSKDVQFSFERLKEVHSPFEWLTAEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPRDAVIQNHHYIGTGPFKLSHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNLT
IDSFGWANFAKLWIQSSMS

Sequences:

>Translated_579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTNQIFDTLV
VYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDIHFHNETVLTSKDVQFSFERLKEVHSPFEWLTAEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPRDAVIQNHHYIGTGPFKLSHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNLT
IDSFGWANFAKLWIQSSMS
>Mature_579_residues
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVEAIESYTD
ELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPSNDMYDILKIPISRKIFPLDPAFVAVTTESHLTNQIFDTLV
VYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDIHFHNETVLTSKDVQFSFERLKEVHSPFEWLTAEIVQIETPSPLQIR
FHLAKPNLFFLHYVSSIQLAILPRDAVIQNHHYIGTGPFKLSHYSEDNIVLEAFSHYFKERALLDRIEFWSIPDHVQIDA
DYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRS
YSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
ELAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQTEHIILFNYHVLKRKTYPSSLKNLT
IDSFGWANFAKLWIQSSMS

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=351, Percent_Identity=26.2108262108262, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1786650, Length=576, Percent_Identity=23.2638888888889, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1789966, Length=387, Percent_Identity=22.7390180878553, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787762, Length=200, Percent_Identity=26.5, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68558; Mature: 68558

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFIHNFVEAIESYTDELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPS
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTNQIFDTLVVYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EDGLTWTFYLRKDIHFHNETVLTSKDVQFSFERLKEVHSPFEWLTAEIVQIETPSPLQIR
CCCCEEEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCHHHHEEEEEEECCCCCEEEE
FHLAKPNLFFLHYVSSIQLAILPRDAVIQNHHYIGTGPFKLSHYSEDNIVLEAFSHYFKE
EEEECCCEEEEEECCCEEEEEECCHHHHCCCEEECCCCEEEECCCCCCHHHHHHHHHHHH
RALLDRIEFWSIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRSYSLEKAKEYLKKSTYNGETI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
EEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHCCCEEEEECHHHCCC
ELAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQTEHII
CEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE
LFNYHVLKRKTYPSSLKNLTIDSFGWANFAKLWIQSSMS
EEEEEEHCCCCCCHHHHCCEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRG
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCC
NKTEILFIHNFVEAIESYTDELLAQEKLKDIFLLLKEPLPLALQKKIENKLHHHFGYEPS
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
NDMYDILKIPISRKIFPLDPAFVAVTTESHLTNQIFDTLVVYNDVTEKMEPHIAHTWELS
CCCHHHHCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EDGLTWTFYLRKDIHFHNETVLTSKDVQFSFERLKEVHSPFEWLTAEIVQIETPSPLQIR
CCCCEEEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCHHHHEEEEEEECCCCCEEEE
FHLAKPNLFFLHYVSSIQLAILPRDAVIQNHHYIGTGPFKLSHYSEDNIVLEAFSHYFKE
EEEECCCEEEEEECCCEEEEEECCHHHHCCCEEECCCCEEEECCCCCCHHHHHHHHHHHH
RALLDRIEFWSIPDHVQIDADYELPNEEENERHDIQIEEIGCIYAGFNFTKPGPHHDIYF
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHH
RKAWRELYDVETILRSIEGRRTIAASSFFPERSRQASKRSYSLEKAKEYLKKSTYNGETI
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE
HIYFFAFKDSANDAYFLKERCESLGIQVELHPFLVSDYMNRSIDQHADIIFMGEVFAADH
EEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCHHHCCCEEEEECHHHCCC
ELAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQTEHII
CEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE
LFNYHVLKRKTYPSSLKNLTIDSFGWANFAKLWIQSSMS
EEEEEEHCCCCCCHHHHCCEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]