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The map label for this gene is ytfH [C]

Identifier: 222094584

GI number: 222094584

Start: 900188

End: 900526

Strand: Reverse

Name: ytfH [C]

Synonym: BCQ_0922

Alternate gene names: 222094584

Gene position: 900526-900188 (Counterclockwise)

Preceding gene: 222094587

Following gene: 222094577

Centisome position: 17.27

GC content: 35.4

Gene sequence:

>339_bases
ATGAACAATATAGATCCAGTTGAATTAACGAAAGGTTTACCTGGCATACCTTGTCCCATCGCTAAAACGCTTGATGTAAT
TCGTACAAAATGGACGTTTTTAATCATTCGCGACCTTCTTATCGAAGGAACATTACGCTTTAGTGATTTACAAAAATCAA
TGGACGGGATTAGCCCGAAAACATTATCGCTTCGACTAAAAGAATTAGAGTCTCAAGGCATTATAACGAGAAAAGTATAT
CCAGAAGTTCCGCCTCGTGTAGAGTACACATTAACGGATAAAGGAAAGCAATTAGAGAGGATTTTTATTGAATTAAAACG
ATTTGGATTAAGTTTATAA

Upstream 100 bases:

>100_bases
TTATAGAAGTAGTGATATTTTTTTCATATAGTTACCAAAAGTATAGTTTTGTGATACTATAAAGCAAATTCATTCAAAAA
ATTTTATGGAGGCTAGTTCC

Downstream 100 bases:

>100_bases
AACAAAAACCCCTTACCGTTGTAAGGGGTTTGATTACTTCGCAAAACTTTCAGCTAGCTGTTTTTCTCTCCACATAAATG
TAATAGCGAGACCAACTATT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVIRTKWTFLIIRDLLIEGTLRFSDLQKSMDGISPKTLSLRLKELESQGIITRKVY
PEVPPRVEYTLTDKGKQLERIFIELKRFGLSL

Sequences:

>Translated_112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVIRTKWTFLIIRDLLIEGTLRFSDLQKSMDGISPKTLSLRLKELESQGIITRKVY
PEVPPRVEYTLTDKGKQLERIFIELKRFGLSL
>Mature_112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVIRTKWTFLIIRDLLIEGTLRFSDLQKSMDGISPKTLSLRLKELESQGIITRKVY
PEVPPRVEYTLTDKGKQLERIFIELKRFGLSL

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=81, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12809; Mature: 12809

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIDPVELTKGLPGIPCPIAKTLDVIRTKWTFLIIRDLLIEGTLRFSDLQKSMDGISPK
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH
TLSLRLKELESQGIITRKVYPEVPPRVEYTLTDKGKQLERIFIELKRFGLSL
HHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNIDPVELTKGLPGIPCPIAKTLDVIRTKWTFLIIRDLLIEGTLRFSDLQKSMDGISPK
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH
TLSLRLKELESQGIITRKVYPEVPPRVEYTLTDKGKQLERIFIELKRFGLSL
HHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]