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The map label for this gene is gerYA [H]

Identifier: 222094517

GI number: 222094517

Start: 839328

End: 840845

Strand: Reverse

Name: gerYA [H]

Synonym: BCQ_0855

Alternate gene names: 222094517

Gene position: 840845-839328 (Counterclockwise)

Preceding gene: 222094518

Following gene: 222094516

Centisome position: 16.13

GC content: 34.78

Gene sequence:

>1518_bases
ATGTTCGGTTTATCATCTAAGAAATCCAAAAATACTAATCCAAAAACACTTTGTTCTATTCCAGAATTTATACAAAGCAT
GACAGAATCTAGCGATTTTGTCTCTTATAACGTACTTGAAAATGAAACATTATGTTTGTTTTATTATAAATCTGTCGTGG
AAGCACTTATTATTAAACAATTTATTTTAACTCCTCTAAAAAAGGAATCGGATCGAATTCAAAACATCTCTGATTTATGT
AATATCGTCTCTATTGAAGATATTATTACCTCCCCTTCTATTGATGATATTCGTGAGAAATTATTAGGGGGATATATTTT
ATTACGCTTAAAAAACAATTCGAATCCCGATCAATATGCTTTAATTCGTGCCGAAAGTACTGTTTTAGGAATACGATTAA
ATAACGATACAGAAAATGAATATAGCGTAATCGGGCCTAAAATCGGTTTCGTTGAAAACCTTGATACAAATATACACTTA
TTACGCCGAAATATTGTAACAGAGCAACTCATATTTAAAGAAATGACCGTCGGAACTATGTCAAAAACGAAAGTAGCAGT
TGCTTATATAGAAGGCGTTACAAATGAACAATTTATCAACACCGCCATACAACGGCTAGAAGACATTGACTTTGATGTCC
CATTTGACGCAACTATGATTGAGCAATTTATTAGTGATAATAGCAATTCACCGTTTCCTGTTTTATTGCCTACAGAACGA
TTAGATCGAGCTGTATATGCATTGGTTAACGGACAAGTTTTAATTTTAACAGATGGCTCTCCATATGCTTTATCAGGACC
GACAACGTTACTAGATTTTTTCATTTCTCCAGAAGATTATTATTTACCGTGGATGATTGGATCGTTCTTTCGCATTATTC
GTTTTTTCGGAGCTATATTTTCTCTTTTTTCATCCGCTATTTATACAGCGGCTTTAACGTATCACTATCAAATGATTCCT
GCTGATTTACTAGGACCTATTATTTTCTCAAGAGCGAACGTACCTTTCCCACCTATTTTAGAAGCACTCTTTTTAGAAAT
TACAATCGAATTGCTTCGTGAAGCAGGAGCACGTTTACCTACGAAAGTAGGACAAACAATTGGTATTGTTGGCGGGATTG
TAATTGGGCAAGCATCTGTTGAAGCTGCTTTAACAAGTACAATTTTATTAATTGCAGTTGCTTTATCCGCTCTTGCATCT
TTCACAACACCGACTGTAAAGATGTCTTCTACTATCCGGTTGTTACGCTTTCCACTTATTCTTTTAGCCGGCGCATTTGG
TGGATTAGGTCTTATTGTCGGGTTTGTATTTATTTTAGCTCATTTAATTAAATTAAAATCACTTGGATCACCTTATTTAT
TACCTTTATATCCATTTCGTGGTTTAGGTACAGCAGAAGGTTTTCTTCGACTACCATTTAGTCAAACAGCACAAAGGCCT
TCCTTCCTTAGACCCACATCAAAATGGCGCTATAACCCGAACAAAGTGAAGCAAAAACGTGATGGTGATAATCAATGA

Upstream 100 bases:

>100_bases
ATACTCTTCCTTTTCTTTATGAACTTTCAATTTTTAAGTATAAATTCCCGTCTTTCCCAAAAACTAACACAAGGAAATGA
TATATGTTAGGGGTGAGAAA

Downstream 100 bases:

>100_bases
AAAAACTTTTCTTGTTCCTTATTATAATCTTTTTTGTTCTACAAACTGGTTGTACACAAACGTATATAGTGGATACACAG
CGTATTATTCATATTGCTGG

Product: spore germination protein gerya

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MFGLSSKKSKNTNPKTLCSIPEFIQSMTESSDFVSYNVLENETLCLFYYKSVVEALIIKQFILTPLKKESDRIQNISDLC
NIVSIEDIITSPSIDDIREKLLGGYILLRLKNNSNPDQYALIRAESTVLGIRLNNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEMTVGTMSKTKVAVAYIEGVTNEQFINTAIQRLEDIDFDVPFDATMIEQFISDNSNSPFPVLLPTER
LDRAVYALVNGQVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLIVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPTSKWRYNPNKVKQKRDGDNQ

Sequences:

>Translated_505_residues
MFGLSSKKSKNTNPKTLCSIPEFIQSMTESSDFVSYNVLENETLCLFYYKSVVEALIIKQFILTPLKKESDRIQNISDLC
NIVSIEDIITSPSIDDIREKLLGGYILLRLKNNSNPDQYALIRAESTVLGIRLNNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEMTVGTMSKTKVAVAYIEGVTNEQFINTAIQRLEDIDFDVPFDATMIEQFISDNSNSPFPVLLPTER
LDRAVYALVNGQVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLIVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPTSKWRYNPNKVKQKRDGDNQ
>Mature_505_residues
MFGLSSKKSKNTNPKTLCSIPEFIQSMTESSDFVSYNVLENETLCLFYYKSVVEALIIKQFILTPLKKESDRIQNISDLC
NIVSIEDIITSPSIDDIREKLLGGYILLRLKNNSNPDQYALIRAESTVLGIRLNNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEMTVGTMSKTKVAVAYIEGVTNEQFINTAIQRLEDIDFDVPFDATMIEQFISDNSNSPFPVLLPTER
LDRAVYALVNGQVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLIVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPTSKWRYNPNKVKQKRDGDNQ

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56174; Mature: 56174

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLSSKKSKNTNPKTLCSIPEFIQSMTESSDFVSYNVLENETLCLFYYKSVVEALIIKQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHH
FILTPLKKESDRIQNISDLCNIVSIEDIITSPSIDDIREKLLGGYILLRLKNNSNPDQYA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCEE
LIRAESTVLGIRLNNDTENEYSVIGPKIGFVENLDTNIHLLRRNIVTEQLIFKEMTVGTM
EEEECCEEEEEEECCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SKTKVAVAYIEGVTNEQFINTAIQRLEDIDFDVPFDATMIEQFISDNSNSPFPVLLPTER
CHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHH
LDRAVYALVNGQVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIF
HHHHHHHHHCCEEEEEECCCCCEECCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLFSSAIYTAALTYHYQMIPADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLP
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRLLRFPLI
HHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
LLAGAFGGLGLIVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCHHHCCCC
SFLRPTSKWRYNPNKVKQKRDGDNQ
CCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MFGLSSKKSKNTNPKTLCSIPEFIQSMTESSDFVSYNVLENETLCLFYYKSVVEALIIKQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHH
FILTPLKKESDRIQNISDLCNIVSIEDIITSPSIDDIREKLLGGYILLRLKNNSNPDQYA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCEE
LIRAESTVLGIRLNNDTENEYSVIGPKIGFVENLDTNIHLLRRNIVTEQLIFKEMTVGTM
EEEECCEEEEEEECCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SKTKVAVAYIEGVTNEQFINTAIQRLEDIDFDVPFDATMIEQFISDNSNSPFPVLLPTER
CHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHH
LDRAVYALVNGQVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIF
HHHHHHHHHCCEEEEEECCCCCEECCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLFSSAIYTAALTYHYQMIPADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLP
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRLLRFPLI
HHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
LLAGAFGGLGLIVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCHHHCCCC
SFLRPTSKWRYNPNKVKQKRDGDNQ
CCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]