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The map label for this gene is gerKA [H]

Identifier: 222094389

GI number: 222094389

Start: 701468

End: 702970

Strand: Reverse

Name: gerKA [H]

Synonym: BCQ_0703

Alternate gene names: 222094389

Gene position: 702970-701468 (Counterclockwise)

Preceding gene: 222094402

Following gene: 222094388

Centisome position: 13.48

GC content: 37.13

Gene sequence:

>1503_bases
ATGACAGAGCAAAAAGAACAACAAAAGAGTACGGATCAAAAGCATATGTTTCCATCACTTCCGGAAAACATTAATTATAT
CGAAAATAAGCTCTGTCATTCAGACGATATAAAAAAATTAGATCTTCCTTTCCAAAACGGCAAAGGAACAATCTTATATA
TCGAATCTTTAGCAGACCCGAGTTTAATTCACCAATTAGCTCTTGAACCTTTATTAACTCGGTCCGATTTATCTTTAGAT
AAAGCTTTTGCCACATTAAGTATGAAGAAAGAAACAAATTTAAATTACGGTGTGCAACTTTTATTACAAGGCAAATCATT
ATATTTTCATGAACAAGTCGACAGTTTTTGTATTTTCGAAACAGCTTTATCTTTAAAGAGAGATATAGCAGAGCCTGATA
ATGAAGGTATTGTACGTGGACCACATACTGGTTTTGTAGAAGATTTAGCAACCAATTTAGCTTCCATTCGTAAACTCATA
AAAAGTCCAAATATCGTCGTTAAATATTTCACACTTGGTGAAGAAATGCATACGAAAGTGGCAATTGCTTATATGCAAAA
CATAGCGAATGACGATTTAGTTACAGAAGTAAAAAGAAGGTTAGAAACGATTAAGACAGATGCACTTATGCCTCCGGGAT
ATATACAAGAATTTATAGAGGATACGTCTTTCTCACCATTTCCGCAGCAATTAAATACAGAGCGTCCAGATAGAGTCGCA
GCAAATTTAATGGAAGGACGAGTTGCTATTTTATCTGATGGAGATCCAACAGCGCTTATCGTTCCTGTTACGTTATTTGC
TTTCTATCAATCACCAGATGATTACAATAACCGCTGGATTGTCGGTTCTTTCGTCCGAATGATTCGCTTAGTGAGTTTTT
TGATTGCTTTTCTCTTACCAGCTATATATATCGCAACCGTAGCCTTTCATCCTGATGTATTGCCGCTTGAACTTGTGTAT
ACAATTAAAGCTTCATTAGAGAAAGTACCGCTCCCTCCTATTTTTGAAGCTCTCTTAATGGAGCTAATTTTCGAATTATT
ACGGGAAGCTGGTATTCGCTTGCCGAGCCGAGTTGGACAAACAATCGGTATTGTAGGCGGTTTAGTAATTGGGGATGCAA
TTGTAAAAGCTGGACTCGTTTCTTACACAATGATTATCGTTGTAGCTTTAACTGCAATCTCATCTTTTCTCGTTCCATCA
AACGATATGAGTTCAGCAGTTCGAATTCTTCGTTTTCCATTAATGCTCCTTGCTGCCCTATTCGGATACGTAGGAATATC
ATTCGGTCTCATTATAACTTTCGTTCACCTATGTCAGCTTCATTCTTTTCATACACCATATCTTTCTCCTGTTGCACCAA
TGCGGATTAAAGATATGAAAGATTCTTTTGTCAGACTACCAATTTGGTCATTTTGGGAACGACCACATGATCCAAAACCG
AAAAAAATGCAGCGCCAACATGTAACGAGAGAGGATGAGGACGGTGACAAACACGCAAAGTAA

Upstream 100 bases:

>100_bases
CGTAACTTTCAAGCTACTTTGTCAAAAATAATCCAAGCATAAATTTCTCACAAAAAGCAAAAATTAACAGAAGTAACTTT
ATCTAAAAGAGGTGGAAATT

Downstream 100 bases:

>100_bases
AATTTCGTTAGTTCAATTTACCTTTTTCGTTATTCAGTGCCAAATCGGAGTAGGCATACTTTCTCTACCGAACCGCCTTC
ACCCGATTGCTAAAGGCGGT

Product: spore germination protein ka

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MTEQKEQQKSTDQKHMFPSLPENINYIENKLCHSDDIKKLDLPFQNGKGTILYIESLADPSLIHQLALEPLLTRSDLSLD
KAFATLSMKKETNLNYGVQLLLQGKSLYFHEQVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLASIRKLI
KSPNIVVKYFTLGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRVA
ANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPAIYIATVAFHPDVLPLELVY
TIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPS
NDMSSAVRILRFPLMLLAALFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHDPKP
KKMQRQHVTREDEDGDKHAK

Sequences:

>Translated_500_residues
MTEQKEQQKSTDQKHMFPSLPENINYIENKLCHSDDIKKLDLPFQNGKGTILYIESLADPSLIHQLALEPLLTRSDLSLD
KAFATLSMKKETNLNYGVQLLLQGKSLYFHEQVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLASIRKLI
KSPNIVVKYFTLGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRVA
ANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPAIYIATVAFHPDVLPLELVY
TIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPS
NDMSSAVRILRFPLMLLAALFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHDPKP
KKMQRQHVTREDEDGDKHAK
>Mature_499_residues
TEQKEQQKSTDQKHMFPSLPENINYIENKLCHSDDIKKLDLPFQNGKGTILYIESLADPSLIHQLALEPLLTRSDLSLDK
AFATLSMKKETNLNYGVQLLLQGKSLYFHEQVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLASIRKLIK
SPNIVVKYFTLGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRVAA
NLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPAIYIATVAFHPDVLPLELVYT
IKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSN
DMSSAVRILRFPLMLLAALFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHDPKPK
KMQRQHVTREDEDGDKHAK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56341; Mature: 56210

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQKEQQKSTDQKHMFPSLPENINYIENKLCHSDDIKKLDLPFQNGKGTILYIESLADP
CCCHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCH
SLIHQLALEPLLTRSDLSLDKAFATLSMKKETNLNYGVQLLLQGKSLYFHEQVDSFCIFE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHHHHH
TALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLASIRKLIKSPNIVVKYFTLGEEMHTKV
HHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
AIAYMQNIANDDLVTEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHH
ANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLP
HHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AIYIATVAFHPDVLPLELVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSNDMSSAVRILRFPLMLLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHDPKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCH
KKMQRQHVTREDEDGDKHAK
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TEQKEQQKSTDQKHMFPSLPENINYIENKLCHSDDIKKLDLPFQNGKGTILYIESLADP
CCHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCH
SLIHQLALEPLLTRSDLSLDKAFATLSMKKETNLNYGVQLLLQGKSLYFHEQVDSFCIFE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHHHHH
TALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLASIRKLIKSPNIVVKYFTLGEEMHTKV
HHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
AIAYMQNIANDDLVTEVKRRLETIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHH
ANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLP
HHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AIYIATVAFHPDVLPLELVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSNDMSSAVRILRFPLMLLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHDPKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCH
KKMQRQHVTREDEDGDKHAK
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]