Click here to switch to the map view.

The map label for this gene is gerKB [H]

Identifier: 222094388

GI number: 222094388

Start: 700381

End: 701496

Strand: Reverse

Name: gerKB [H]

Synonym: BCQ_0702

Alternate gene names: 222094388

Gene position: 701496-700381 (Counterclockwise)

Preceding gene: 222094389

Following gene: 222094387

Centisome position: 13.45

GC content: 34.77

Gene sequence:

>1116_bases
ATGAGGACGGTGACAAACACGCAAAGTAAAATTTCGTTAGTTCAATTTACCTTTTTCGTTATTCAGTGCCAAATCGGAGT
AGGCATACTTTCTCTACCGAACCGCCTTCACCCGATTGCTAAAGGCGGTGGGTGGATTTCTGCACTCATCGCTGGGCTTG
CGATTCAGCTTATTATTTTACTTATGTGGCTTTTCTTAAAACGATTTCCTGATGCAGATATGTATGAAAGTGTTTGTATG
CTATTTGGGAATAAGTTTGGAAAACTATTAGGTTTTGCTTATGTTTTTTATTTTACCCTTATTGGTATGACGGTTATGTT
GAATGCTTGTAATGTCATTAAAGTGTGGATATTACAAGCAACTCCTTGGTATGCCATTCTCATACTATTTACAATAGCTT
GTTGTTATGTAGCTTATAACACTTTTAAAGTCATCGTACGATTTTATGTCATGGCCTCTATTCTCATTTTACCAATGGCT
CTTTTAATCGCCTTAGGACTCACGCGAGCCGATTTTTCTTATATTTTTCCAATTACAGAAGCTGGATGGTGGAATATTAT
TCAAGCATCTAAAGAAACAATTACAGCTATGTATGGTTTTGAAATTATTCTTATCGCTTTCCCCAAAGTAAATGGGGGTT
CTATTGCAAAACTAAAGGCAATTTCTATCGCGAATGGATTTGTAACCCTTTTTTATACTTTTACTGTTTGGATTTGCTTT
ATCGTATTTAGTCCAAAACAAATTGAGCTTATTCCAGAACCAGTTGCTTACTTATTACGATCCTTGCATATCGGGATTAT
AGACCGAACTGATTTACTATTCATACCAATTTGGATGATAACAGTTGTAGCTTCTATCGCTAGTTATTACTGTGCTGCTT
CTATAGGAATTGGACATATATTCAATCTTGGTAATCATAAAAAGGCTGTCCCAATCGTTGGTATTATTGCTTTTAGTATA
GCCCTATTTATCGATACACCTGAAGAATTAAAAGTGATTGCAACTTTCACAGATAAGTTCACCTATATTTTCATCGTTGT
CCTCCCTCTTTTATTTCTACTTTATTCAGTAATAAGAAATAAGAAAGGAGAACAGTATGTTCAAAAAAAGAGTTAA

Upstream 100 bases:

>100_bases
ATGAAAGATTCTTTTGTCAGACTACCAATTTGGTCATTTTGGGAACGACCACATGATCCAAAACCGAAAAAAATGCAGCG
CCAACATGTAACGAGAGAGG

Downstream 100 bases:

>100_bases
ATTACTTTTTGTATTATGCACTAGTGCATTCCTTGCTGGCTGTTGGGATCAAGAACCATTAAGGGAAGCAAGGTTAGCTT
ATAGTATTGGATCTGATATT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRTVTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCM
LFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWILQATPWYAILILFTIACCYVAYNTFKVIVRFYVMASILILPMA
LLIALGLTRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGGSIAKLKAISIANGFVTLFYTFTVWICF
IVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLGNHKKAVPIVGIIAFSI
ALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS

Sequences:

>Translated_371_residues
MRTVTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCM
LFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWILQATPWYAILILFTIACCYVAYNTFKVIVRFYVMASILILPMA
LLIALGLTRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGGSIAKLKAISIANGFVTLFYTFTVWICF
IVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLGNHKKAVPIVGIIAFSI
ALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS
>Mature_371_residues
MRTVTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIILLMWLFLKRFPDADMYESVCM
LFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWILQATPWYAILILFTIACCYVAYNTFKVIVRFYVMASILILPMA
LLIALGLTRADFSYIFPITEAGWWNIIQASKETITAMYGFEIILIAFPKVNGGSIAKLKAISIANGFVTLFYTFTVWICF
IVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHIFNLGNHKKAVPIVGIIAFSI
ALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRNKKGEQYVQKKS

Specific function: Involved in the response to the germinative mixture of L-asparagine, glucose, fructose and potassium ions (AGFK). Could be an amino acid transporter. Cannot stimulate germination in the absence of gerD and gerK gene products (fructose and glucose receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41698; Mature: 41698

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIIL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHCCCHHHHHHHHHHHHHHHHH
LMWLFLKRFPDADMYESVCMLFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWILQA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECC
TPWYAILILFTIACCYVAYNTFKVIVRFYVMASILILPMALLIALGLTRADFSYIFPITE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
AGWWNIIQASKETITAMYGFEIILIAFPKVNGGSIAKLKAISIANGFVTLFYTFTVWICF
CCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
IVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHI
HHCCCCCEEECCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FNLGNHKKAVPIVGIIAFSIALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRN
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
KKGEQYVQKKS
CCCHHHHHCCC
>Mature Secondary Structure
MRTVTNTQSKISLVQFTFFVIQCQIGVGILSLPNRLHPIAKGGGWISALIAGLAIQLIIL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHCCCHHHHHHHHHHHHHHHHH
LMWLFLKRFPDADMYESVCMLFGNKFGKLLGFAYVFYFTLIGMTVMLNACNVIKVWILQA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECC
TPWYAILILFTIACCYVAYNTFKVIVRFYVMASILILPMALLIALGLTRADFSYIFPITE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
AGWWNIIQASKETITAMYGFEIILIAFPKVNGGSIAKLKAISIANGFVTLFYTFTVWICF
CCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
IVFSPKQIELIPEPVAYLLRSLHIGIIDRTDLLFIPIWMITVVASIASYYCAASIGIGHI
HHCCCCCEEECCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FNLGNHKKAVPIVGIIAFSIALFIDTPEELKVIATFTDKFTYIFIVVLPLLFLLYSVIRN
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
KKGEQYVQKKS
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8012571; 9384377 [H]