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The map label for this gene is lytR

Identifier: 222094356

GI number: 222094356

Start: 666311

End: 667324

Strand: Reverse

Name: lytR

Synonym: BCQ_0670

Alternate gene names: NA

Gene position: 667324-666311 (Counterclockwise)

Preceding gene: 222094357

Following gene: 222094355

Centisome position: 12.8

GC content: 34.62

Gene sequence:

>1014_bases
ATGAAATCCGATATGCACAAAGATACTCGAGCCAAAAAGGGACGCTCAAAGAAAAAACGTCTACTTTGGTTCCTTCTTAT
TCCATTACTGGTTATAGCACTTGGAGCAGGAGGCTACTCCTTCCATATATACAGTAAAGCAAAATCAATTTTAAATAATG
CCTATTCTGAACTTGGTCGCGGAGACAAATCCAGCAAACGTGAAAAAGCCGTTAAACCTATGACTGACAACATTTCCATA
CTTATTATGGGTGTTGATGAAAGTGATATTAGAGACAAGAATTATGGGAAAGCAACTCGTACAGATGCACTATTACTTGC
AACCATTAATAAAAACGATAAATCTGTTAAGCTTGTCAGTATTCCACGTGATTCACGTGTCTATATTAAATCACGTGATA
AATACGATAAAATTACACATGCGCACGTATTCGGTGGTGTAGATAGCACAATTGATACGGTAGAGAACTTTTTAGATGTT
CCAGTTGATTACTATGTAAAATTCAATTTTAAATCCTTTATCAAAATTGTTGATTCCCTTGGTGGGATTACTGTAGATGT
TCCAGTGGAGTTCACAGAACAAAATAGTAAAGATGAAGCAGATGCAATTCACCTTAAAAAGGGACGTCAACATTTAAATG
GAGAAGAAGCACTGGCACTAGCGAGAACTCGTCATATCGATAGTGATTATATGCGCGGTCAACGACAACAGCTTGTTTTA
GAAGCTATTGCTGAAAAGGCACTATCTCTGAATTCCATTAATAAAATCGGTGGTTTATTAGACGCTGTTGATAAAGACTT
AAAAACAAATTTAACTTTTGATGATATGATGGCAATTGCAAAAAATTCAATGGATTCCAATTTAAAACTGGATAAAATGC
AAGTAGAAGGTACTGATAAATATATAGGTGGTATTTATTATTACGTTCCAAACGAAAAAAGCGTCGATAATATTTCGACA
ACACTACAAGAACATCTCGGTGTTACGAATAAAAATGAACATAAAAAATTATAA

Upstream 100 bases:

>100_bases
ATACATGTACAATCGCTTTTATTTAGCGTACAATATTTTTTATGTGTTTGAATGCGCTTCTAGATGTATATACTTTGATA
GTTTTAAAGGAGAAAAAATG

Downstream 100 bases:

>100_bases
TAAAAAGGCTGCTAGAACTTTCTAGACAGCCTTTTTATTATAATTTTCAACATATTTATCGTACATATTGTGACAAAAAG
AGACAATTATTACAACAGTG

Product: LytR family transcriptional regulator

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKSDMHKDTRAKKGRSKKKRLLWFLLIPLLVIALGAGGYSFHIYSKAKSILNNAYSELGRGDKSSKREKAVKPMTDNISI
LIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDV
PVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVL
EAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMAIAKNSMDSNLKLDKMQVEGTDKYIGGIYYYVPNEKSVDNIST
TLQEHLGVTNKNEHKKL

Sequences:

>Translated_337_residues
MKSDMHKDTRAKKGRSKKKRLLWFLLIPLLVIALGAGGYSFHIYSKAKSILNNAYSELGRGDKSSKREKAVKPMTDNISI
LIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDV
PVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVL
EAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMAIAKNSMDSNLKLDKMQVEGTDKYIGGIYYYVPNEKSVDNIST
TLQEHLGVTNKNEHKKL
>Mature_337_residues
MKSDMHKDTRAKKGRSKKKRLLWFLLIPLLVIALGAGGYSFHIYSKAKSILNNAYSELGRGDKSSKREKAVKPMTDNISI
LIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDV
PVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVL
EAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMAIAKNSMDSNLKLDKMQVEGTDKYIGGIYYYVPNEKSVDNIST
TLQEHLGVTNKNEHKKL

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37890; Mature: 37890

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDMHKDTRAKKGRSKKKRLLWFLLIPLLVIALGAGGYSFHIYSKAKSILNNAYSELGR
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
GDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVS
CCCCHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
IPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSL
CCCCCEEEEECCCCHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHC
GGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVL
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHH
EAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMAIAKNSMDSNLKLDKMQVEGTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
YIGGIYYYVPNEKSVDNISTTLQEHLGVTNKNEHKKL
EECEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKSDMHKDTRAKKGRSKKKRLLWFLLIPLLVIALGAGGYSFHIYSKAKSILNNAYSELGR
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
GDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVS
CCCCHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
IPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSL
CCCCCEEEEECCCCHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHC
GGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVL
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHH
EAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMAIAKNSMDSNLKLDKMQVEGTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
YIGGIYYYVPNEKSVDNISTTLQEHLGVTNKNEHKKL
EECEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]