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The map label for this gene is yfhF [H]

Identifier: 222094250

GI number: 222094250

Start: 542853

End: 543758

Strand: Reverse

Name: yfhF [H]

Synonym: BCQ_0543

Alternate gene names: 222094250

Gene position: 543758-542853 (Counterclockwise)

Preceding gene: 222094253

Following gene: 222094249

Centisome position: 10.43

GC content: 36.98

Gene sequence:

>906_bases
GTGAAAATCGCAATTTCTGGTGGTACCGGCTTTATAGGTAAATACCTTTCTACCTTTTTTATTCAAAAAGGATATACTGT
TTACATTCTCTCACGAAAAAAAACTGCTGAAACTTCCGATCCTAACCTTCAGTATGTACAATGGACACCAGATTTACAAA
CCTTCCCCCTCTCTTCTATTGATGTAGTTATTAATCTAGCTGGAGAGTCTATTAATAGTAGATGGACAAAGAAACAAAAG
AAAGTCATTTTAAACAGTAGAATTCAAACAACAAAAGGACTCATTAAACAATTGCAGGCACTCCCTACAAAACCACACAC
ATTTATTAACGCAAGTGCAATTGGATACTATGGAACGTCTGAAACCGAGTCTTTTACAGAACAGCATGTGACTCCTGGAA
ATGACTTTTTAGCAAATACAGTATATTCATGGGAACAAGAAGCATCTAAAGCACGTGCTCTCGGAATACGGACAATCTAT
GCAAGATTCGGAGTCGTATTAGGTCCAGACGGAGGAGCCCTTCCAAAAATGCTACTTCCCTATCAATTCTATATCGGAGG
TACAGTTGGATCTGGAAATCAATGGTTATCATGGATTCATATAGACGATGTCGCTTCCATGATTGATTTCATCATACACA
AAGAAGAAATTGATGGACCTCTTAACATTACAGCTCCTGATCCTATAAGAATGAAGGAATTTGGAGAAATCATTGCAACT
ATAATAAAAAAACCTCATTGGTTACCTGTCCCTTCATTTATGCTTCATGCTTTATTAGGCGAGATGAGCATACTTGTACT
AGAAGGGCAACATGTATTACCTAGTAAAGCAATTGAGTATGGGTATCAATACACATTTCCGTCAATAGACCATGCATTAC
AAAATATACTTTCGCATACAATGTAG

Upstream 100 bases:

>100_bases
TTTTTGTAATGACAGCCATACTCTCACCTCTCTATTATTTTAACATAGTCAAGGAACGTTTTTGCTTTTCAAGAATATAT
ATAATGAGGAGGAAATAATT

Downstream 100 bases:

>100_bases
TACTTCTAAAACACAGTTTTACAGAGGGCCCTTTCAAAACTTTTATTTTCTAGCATCCGGAGCATTATTACACAAATAAT
CTTTCAGTTACTTTCCCTTA

Product: cell division inhibitor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKIAISGGTGFIGKYLSTFFIQKGYTVYILSRKKTAETSDPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KVILNSRIQTTKGLIKQLQALPTKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARALGIRTIY
ARFGVVLGPDGGALPKMLLPYQFYIGGTVGSGNQWLSWIHIDDVASMIDFIIHKEEIDGPLNITAPDPIRMKEFGEIIAT
IIKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEYGYQYTFPSIDHALQNILSHTM

Sequences:

>Translated_301_residues
MKIAISGGTGFIGKYLSTFFIQKGYTVYILSRKKTAETSDPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KVILNSRIQTTKGLIKQLQALPTKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARALGIRTIY
ARFGVVLGPDGGALPKMLLPYQFYIGGTVGSGNQWLSWIHIDDVASMIDFIIHKEEIDGPLNITAPDPIRMKEFGEIIAT
IIKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEYGYQYTFPSIDHALQNILSHTM
>Mature_301_residues
MKIAISGGTGFIGKYLSTFFIQKGYTVYILSRKKTAETSDPNLQYVQWTPDLQTFPLSSIDVVINLAGESINSRWTKKQK
KVILNSRIQTTKGLIKQLQALPTKPHTFINASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARALGIRTIY
ARFGVVLGPDGGALPKMLLPYQFYIGGTVGSGNQWLSWIHIDDVASMIDFIIHKEEIDGPLNITAPDPIRMKEFGEIIAT
IIKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEYGYQYTFPSIDHALQNILSHTM

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=304, Percent_Identity=34.5394736842105, Blast_Score=191, Evalue=5e-49,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=36.241610738255, Blast_Score=204, Evalue=7e-54,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=32.0945945945946, Blast_Score=177, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33593; Mature: 33593

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAISGGTGFIGKYLSTFFIQKGYTVYILSRKKTAETSDPNLQYVQWTPDLQTFPLSSI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCE
DVVINLAGESINSRWTKKQKKVILNSRIQTTKGLIKQLQALPTKPHTFINASAIGYYGTS
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
ETESFTEQHVTPGNDFLANTVYSWEQEASKARALGIRTIYARFGVVLGPDGGALPKMLLP
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCC
YQFYIGGTVGSGNQWLSWIHIDDVASMIDFIIHKEEIDGPLNITAPDPIRMKEFGEIIAT
EEEEECCEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
IIKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEYGYQYTFPSIDHALQNILSHT
HHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEECCCHHHHHHHHHHHHC
M
C
>Mature Secondary Structure
MKIAISGGTGFIGKYLSTFFIQKGYTVYILSRKKTAETSDPNLQYVQWTPDLQTFPLSSI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCE
DVVINLAGESINSRWTKKQKKVILNSRIQTTKGLIKQLQALPTKPHTFINASAIGYYGTS
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
ETESFTEQHVTPGNDFLANTVYSWEQEASKARALGIRTIYARFGVVLGPDGGALPKMLLP
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCC
YQFYIGGTVGSGNQWLSWIHIDDVASMIDFIIHKEEIDGPLNITAPDPIRMKEFGEIIAT
EEEEECCEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
IIKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEYGYQYTFPSIDHALQNILSHT
HHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEECCCHHHHHHHHHHHHC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]