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The map label for this gene is ybfM [H]

Identifier: 222094211

GI number: 222094211

Start: 504365

End: 504961

Strand: Direct

Name: ybfM [H]

Synonym: BCQ_0504

Alternate gene names: 222094211

Gene position: 504365-504961 (Clockwise)

Preceding gene: 222094209

Following gene: 222094215

Centisome position: 9.67

GC content: 36.01

Gene sequence:

>597_bases
ATGGAACAACATATTGGCGAGTTAATCGCACATTATGGGTATTTTGGAATTATTATAGCTTTAGCTGGCGGGATTGTTGG
ATTACCGATACCAGACGAGTTTTTATTGACCTTCGTTGGTTATAACGTTTCAAAAGGCGTTATGTCAGGAACTGCTGCGT
TTTTAAGTGGGATGGCTGGTGCGATGTTAGGCATTACATTAAGCTACATATTAGGTTTAAAACTTGGACTCCCTGTTTTA
AAAAAATATGGACCGAAAATTAGAATTAAAGAACATCACATTGAAAAAACACATATTTTATTTGAAAAATATGGCCCATT
TCTTTTAATAGTTGGTTATTTTATCCCAGGAGTACGTCATTTAACAGCGTATTTTGCTGGGATGTCGAATTTAACACTTT
GGCGTTTTTGTTTGTACGCTTACGGTGGTGCACTTATTTGGATCAGTGTTTTTATTGGACTTGGCTGGAAGTTAGGAGAG
AAGTGGCGTTTCGTTGAGTATAGTTTGCATCATTATGGAATATGGATTTTATCCATTTCAGTAGTTGTTACATGTGTCGT
ATGGTTTTACATAAAGAAAAAGAAAAACCGCGAGTAG

Upstream 100 bases:

>100_bases
TTATAAAAACAATGTATAGTGAATATGTATACCATGTTTGTCTGAAAGATAGAAAGGGCACAATGTGGAATAACGATCGT
GTATAGGATGTGTCTTCCGA

Downstream 100 bases:

>100_bases
CGGTTTTTTAGCTGAAAGCGATAAATAGTACACCAGCTGTAATAAAGACAACACCAATACCAGTCATAAAGTTTAATTTT
TCGCCGAGTATAATCATAGC

Product: deda family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLIVGYFIPGVRHLTAYFAGMSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILSISVVVTCVVWFYIKKKKNRE

Sequences:

>Translated_198_residues
MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLIVGYFIPGVRHLTAYFAGMSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILSISVVVTCVVWFYIKKKKNRE
>Mature_198_residues
MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLIVGYFIPGVRHLTAYFAGMSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILSISVVVTCVVWFYIKKKKNRE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=139, Percent_Identity=32.3741007194245, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22294; Mature: 22294

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAG
CHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGITLSYILGLKLGLPVLKKYGPKIRIKEHHIEKTHILFEKYGPFLLIVGYFIPGVRH
HHHHHHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHH
LTAYFAGMSNLTLWRFCLYAYGGALIWISVFIGLGWKLGEKWRFVEYSLHHYGIWILSIS
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHEEEHHHHHHHHHHHHH
VVVTCVVWFYIKKKKNRE
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAG
CHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGITLSYILGLKLGLPVLKKYGPKIRIKEHHIEKTHILFEKYGPFLLIVGYFIPGVRH
HHHHHHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHH
LTAYFAGMSNLTLWRFCLYAYGGALIWISVFIGLGWKLGEKWRFVEYSLHHYGIWILSIS
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHEEEHHHHHHHHHHHHH
VVVTCVVWFYIKKKKNRE
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]