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The map label for this gene is sipS [H]

Identifier: 222094209

GI number: 222094209

Start: 500678

End: 501097

Strand: Direct

Name: sipS [H]

Synonym: BCQ_0502

Alternate gene names: 222094209

Gene position: 500678-501097 (Clockwise)

Preceding gene: 222094207

Following gene: 222094211

Centisome position: 9.6

GC content: 31.43

Gene sequence:

>420_bases
ATGAAGCCAACGTTACAAGATGGGGATAAGGTGATTGTGAATAAGTTGGCAAAGCAATTTGAAAGTTATGGGAGAGAAGA
TATTATTGTTGTAAAGACAGATAATTTTTATGTGAAAAGGGTTATTGGTTTGCCTGGCGATGTTATTGAGGTGAGAAATG
ATCAATTATATGTGAATCATGAAGTGATAGAGGAAGCGTATTTGTATAGTAATAAAAAACAAGCTGAAAAAAAACTTATG
AATTTAACGGAGGACTTTGGACCGATTACAGTTCCTAAAAATAAGATTTTTGTTATGGGAGATAATCGCTTAATAAGCAG
AGATAGTAGAAATGGTTTAGGACTCATTGATAAAGCTGATGTATTAGGAGAATTAGCAGCAATTTATTATCCATTTGAAC
ATATGAAAATAATGAATTAA

Upstream 100 bases:

>100_bases
ACGTTTGCGTGAATTCTTTGGAACAATTGCAATTGCTTGTTTGCTCGTGCTTTTGGCGAAAATTTTCGTATTTTTTCCTA
CGACTGTAAAAGGGGCGTCT

Downstream 100 bases:

>100_bases
AGTAAAAAACCAAGCAAATTTCAGTTTGCTTGGTTTTTTATGTTAAATCGTAGGAGACTCATTAAATTCATAGACGTCTT
CATTGTTTTTGTGCGTACTT

Product: signal peptidase i

Products: NA

Alternate protein names: SPase I; Leader peptidase I [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKPTLQDGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNHEVIEEAYLYSNKKQAEKKLM
NLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKADVLGELAAIYYPFEHMKIMN

Sequences:

>Translated_139_residues
MKPTLQDGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNHEVIEEAYLYSNKKQAEKKLM
NLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKADVLGELAAIYYPFEHMKIMN
>Mature_139_residues
MKPTLQDGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNHEVIEEAYLYSNKKQAEKKLM
NLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKADVLGELAAIYYPFEHMKIMN

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019756
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 15952; Mature: 15952

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00760 SPASE_I_2 ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTLQDGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNH
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEEECCCEEEECH
EVIEEAYLYSNKKQAEKKLMNLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKAD
HHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCCCCCCCHHH
VLGELAAIYYPFEHMKIMN
HHHHHHHHHCCHHHEEECC
>Mature Secondary Structure
MKPTLQDGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNH
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEEECCCEEEECH
EVIEEAYLYSNKKQAEKKLMNLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKAD
HHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCCCCCCCHHH
VLGELAAIYYPFEHMKIMN
HHHHHHHHHCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7578273 [H]