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The map label for this gene is ydbJ [H]

Identifier: 222094164

GI number: 222094164

Start: 456280

End: 456951

Strand: Direct

Name: ydbJ [H]

Synonym: BCQ_0457

Alternate gene names: 222094164

Gene position: 456280-456951 (Clockwise)

Preceding gene: 222094163

Following gene: 222094165

Centisome position: 8.75

GC content: 28.27

Gene sequence:

>672_bases
ATGCTTGAATTGATAAACATAAAAAAAAAATATGGTGAATCAACTTACATTTTTGATGGAATAAACTTGAAAGTAGACAA
TATGAGTATTGTAGAATTAGTGGGTAAAAATGGTATAGGTAAATCAACGTTATTGAATATAATTGGTGGAATGACGAAAT
TTGATGGGGAACTCATACTAAATAAATTTTCAGTAAAGGAAAATTTTAAAGAGTATATTGCAGGTGTCTCATTAATTGGT
AATACACCTTTCTTATACGATTATTTAACACCCTCTGAAACAATAGATATGGTACTATCTTTCCTAAATAGAGAAAGATT
AGATTCATCTTTAGAACATCTCATTCAAGAGATTGGACTCGATAAATATCAAAATACTTATACACGTGAATTATCATTAG
GAACTAGACAAAAACTATCATTAATACTAGCTCTTCTAACTTCGCCTAATTTAATTCTCCTTGATGAACCTTTTGTTAAT
TTTGACATTAGGTCGAGGAAAGTTACTCTAGATTATCTGAAGGATTATATAATTCAACATAAAGCAATTTTAATTTATGC
AACTCATTCAACAGATACTGATGTAGCGAATTTTTCAGATAAAAAAATAATTTTAAAAAGAGATGAGCAACTCGATAAAG
TAGTTCTGGAGAGTGATAATTGTGAAACCTAA

Upstream 100 bases:

>100_bases
TTCAATGAGATTAGGAAATATATATCCTATAATGGTTTTCTTCATTGTATATTCTAGTTATTTATTGTTATATAATTTCC
TTACAAAAGAGAGGTAAGAC

Downstream 100 bases:

>100_bases
ATTATTTAGTATTTGTTTTATTGCTTGTTCAGTTATAGGAAGCTCATTTTTCTTTTTGGGTTTTTTACTACTTCCTAATG
AACAGTTTAGTCCCAATTTA

Product: ydbj

Products: NA

Alternate protein names: Sulfate-transporting ATPase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLELINIKKKYGESTYIFDGINLKVDNMSIVELVGKNGIGKSTLLNIIGGMTKFDGELILNKFSVKENFKEYIAGVSLIG
NTPFLYDYLTPSETIDMVLSFLNRERLDSSLEHLIQEIGLDKYQNTYTRELSLGTRQKLSLILALLTSPNLILLDEPFVN
FDIRSRKVTLDYLKDYIIQHKAILIYATHSTDTDVANFSDKKIILKRDEQLDKVVLESDNCET

Sequences:

>Translated_223_residues
MLELINIKKKYGESTYIFDGINLKVDNMSIVELVGKNGIGKSTLLNIIGGMTKFDGELILNKFSVKENFKEYIAGVSLIG
NTPFLYDYLTPSETIDMVLSFLNRERLDSSLEHLIQEIGLDKYQNTYTRELSLGTRQKLSLILALLTSPNLILLDEPFVN
FDIRSRKVTLDYLKDYIIQHKAILIYATHSTDTDVANFSDKKIILKRDEQLDKVVLESDNCET
>Mature_223_residues
MLELINIKKKYGESTYIFDGINLKVDNMSIVELVGKNGIGKSTLLNIIGGMTKFDGELILNKFSVKENFKEYIAGVSLIG
NTPFLYDYLTPSETIDMVLSFLNRERLDSSLEHLIQEIGLDKYQNTYTRELSLGTRQKLSLILALLTSPNLILLDEPFVN
FDIRSRKVTLDYLKDYIIQHKAILIYATHSTDTDVANFSDKKIILKRDEQLDKVVLESDNCET

Specific function: Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=192, Percent_Identity=26.5625, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI153792144, Length=209, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=25.3588516746411, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI27262624, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27262626, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27436953, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI150417984, Length=179, Percent_Identity=29.0502793296089, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=25.1162790697674, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787029, Length=198, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=27.5229357798165, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786319, Length=181, Percent_Identity=28.7292817679558, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI87081834, Length=179, Percent_Identity=29.608938547486, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786253, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082267, Length=191, Percent_Identity=25.130890052356, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789991, Length=223, Percent_Identity=29.1479820627803, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=169, Percent_Identity=25.4437869822485, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=21.8604651162791, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789751, Length=211, Percent_Identity=27.9620853080569, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788450, Length=176, Percent_Identity=28.9772727272727, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1789032, Length=220, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI48994943, Length=187, Percent_Identity=26.7379679144385, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=22.7272727272727, Blast_Score=60, Evalue=9e-11,
Organism=Escherichia coli, GI87082064, Length=193, Percent_Identity=27.4611398963731, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17510237, Length=174, Percent_Identity=29.8850574712644, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=27.8606965174129, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007328, Length=203, Percent_Identity=29.5566502463054, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574150, Length=203, Percent_Identity=29.5566502463054, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI85725262, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571209, Length=214, Percent_Identity=26.1682242990654, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI116007184, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574744, Length=198, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014769
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR005666 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.25 [H]

Molecular weight: Translated: 25440; Mature: 25440

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELINIKKKYGESTYIFDGINLKVDNMSIVELVGKNGIGKSTLLNIIGGMTKFDGELIL
CCEEEECHHHCCCCEEEEECCEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHH
NKFSVKENFKEYIAGVSLIGNTPFLYDYLTPSETIDMVLSFLNRERLDSSLEHLIQEIGL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DKYQNTYTRELSLGTRQKLSLILALLTSPNLILLDEPFVNFDIRSRKVTLDYLKDYIIQH
CHHCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEHHHHHHHHHCC
KAILIYATHSTDTDVANFSDKKIILKRDEQLDKVVLESDNCET
CEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHEECCCCCCC
>Mature Secondary Structure
MLELINIKKKYGESTYIFDGINLKVDNMSIVELVGKNGIGKSTLLNIIGGMTKFDGELIL
CCEEEECHHHCCCCEEEEECCEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHH
NKFSVKENFKEYIAGVSLIGNTPFLYDYLTPSETIDMVLSFLNRERLDSSLEHLIQEIGL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DKYQNTYTRELSLGTRQKLSLILALLTSPNLILLDEPFVNFDIRSRKVTLDYLKDYIIQH
CHHCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEHHHHHHHHHCC
KAILIYATHSTDTDVANFSDKKIILKRDEQLDKVVLESDNCET
CEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]