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The map label for this gene is yxkH [H]

Identifier: 222094088

GI number: 222094088

Start: 359899

End: 360981

Strand: Reverse

Name: yxkH [H]

Synonym: BCQ_0381

Alternate gene names: 222094088

Gene position: 360981-359899 (Counterclockwise)

Preceding gene: 222094089

Following gene: 222094087

Centisome position: 6.92

GC content: 34.16

Gene sequence:

>1083_bases
ATGAGAAAATATGTTGCAATCGCTTTATGCACATCTGCCATTCTAGCAGGTTGTAATACTAGCAATGTAAACCAGGAACC
TAAAAAAGAAAAAAAGGTTCAAGAAACTAAGAAACAAGCAGATACTGTACAAGAACAAGGTAAAATTTCTTATCAGCCCA
TTACACACGAAATTACAAATACTACCATTCATATGACAGATATAAAAGATGCTTTAACTGAAGTACAATATAAAATTTGG
CGTACTGCTGATGGAAAGGAACACACTAAATCTTTTTCTTCTAAAGAAAAGGAGAAACAGTTTACACTTCCTTTTGACAT
AAAAGAATTTGAAGGAAAACGCGGTGAATTTCAAATTGAAGCAATAGGAATAAAAGAAGATGGGAAAACCATTCCACTCA
CAAAAGCTGCTATTACTTTCGAACAAAAGGTTCCCGTTCTTATGTATCATGCAATTGATGATTATCACGGACAAGGCATT
AAAGATTTATTCGTCTCACCTGCTAACTTTGAAGCCCAAATGAAATATTTAAAAGACAACGGCTATACATTACTAACTTT
TGAACGTTGGGGTGATATTAATAAAGTAAATAAACCTATCTTTGTTACATTTGATGACGGTATGAAAAATAATATGAATG
CATTCCATGTTTTACAAAAGCTAAAAGACGATACATTTAAACCGGCGGCAACAGAATATATGATTGTTGATAACGTTGAT
GTAGAAGGATCACTGTCTACTTCTGAAATAAAAGAAATGGTCGATTCCGGCATTTTCTCAGTGCAATCTCATACAACGAC
GCATGCAGACTTACCGAAAATTACAAACTATGAAGAGGAATTAAAAGGATCAAAAGAAAAGTTAGAAAAAATAACAGGTA
AGCCCGTTATCGCAGTTGCTTATCCATTCGGTCATGTAGATGATAAAGTCGTTGCAGAAACGAAGAAATATTATCAATTT
GCGACGACAACAAAACCCGGAAAATTCATTACAAAAGGTGAACCCGATGAATTGTTAAAAATGAAGCGTGTTCGCATACA
CCATACGACGACCGTAGAACAGTTTGCTTCTTCGATTAAATAA

Upstream 100 bases:

>100_bases
TCAAATGCTATGATGAACAAGGGTATGTCCCCACCTCTCTTACAGCGGTGGGGATTTTAAATATAAATATATAACATAAT
ACACAATAGAAGGTGATTTT

Downstream 100 bases:

>100_bases
CGATGAGGGCTCAATATATTTTGAGCTCTCTTTTTACGCTATATTTATATATATTTTTTGAATTTTCTTGTATTATATAT
AGTAAGAAATCTTTCAAATT

Product: polysaccharide deacetylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRKYVAIALCTSAILAGCNTSNVNQEPKKEKKVQETKKQADTVQEQGKISYQPITHEITNTTIHMTDIKDALTEVQYKIW
RTADGKEHTKSFSSKEKEKQFTLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKAAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVDNVD
VEGSLSTSEIKEMVDSGIFSVQSHTTTHADLPKITNYEEELKGSKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Sequences:

>Translated_360_residues
MRKYVAIALCTSAILAGCNTSNVNQEPKKEKKVQETKKQADTVQEQGKISYQPITHEITNTTIHMTDIKDALTEVQYKIW
RTADGKEHTKSFSSKEKEKQFTLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKAAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVDNVD
VEGSLSTSEIKEMVDSGIFSVQSHTTTHADLPKITNYEEELKGSKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
>Mature_360_residues
MRKYVAIALCTSAILAGCNTSNVNQEPKKEKKVQETKKQADTVQEQGKISYQPITHEITNTTIHMTDIKDALTEVQYKIW
RTADGKEHTKSFSSKEKEKQFTLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKAAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVDNVD
VEGSLSTSEIKEMVDSGIFSVQSHTTTHADLPKITNYEEELKGSKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 40880; Mature: 40880

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYVAIALCTSAILAGCNTSNVNQEPKKEKKVQETKKQADTVQEQGKISYQPITHEITN
CCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC
TTIHMTDIKDALTEVQYKIWRTADGKEHTKSFSSKEKEKQFTLPFDIKEFEGKRGEFQIE
CEEEEEHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCEECCCCCHHHHCCCCCCEEEE
AIGIKEDGKTIPLTKAAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCEEHHEEEECCCCCEEEEEEHHCCCCCCCHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVDNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
VEGSLSTSEIKEMVDSGIFSVQSHTTTHADLPKITNYEEELKGSKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEEEHHHHHHHHHHCC
>Mature Secondary Structure
MRKYVAIALCTSAILAGCNTSNVNQEPKKEKKVQETKKQADTVQEQGKISYQPITHEITN
CCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC
TTIHMTDIKDALTEVQYKIWRTADGKEHTKSFSSKEKEKQFTLPFDIKEFEGKRGEFQIE
CEEEEEHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCEECCCCCHHHHCCCCCCEEEE
AIGIKEDGKTIPLTKAAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCEEHHEEEECCCCCEEEEEEHHCCCCCCCHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVDNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
VEGSLSTSEIKEMVDSGIFSVQSHTTTHADLPKITNYEEELKGSKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]