Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636268

Identifier: 221636268

GI number: 221636268

Start: 844180

End: 846096

Strand: Reverse

Name: 221636268

Synonym: trd_A0862

Alternate gene names: NA

Gene position: 846096-844180 (Counterclockwise)

Preceding gene: 221636269

Following gene: 221636267

Centisome position: 92.19

GC content: 67.14

Gene sequence:

>1917_bases
ATGCGGGTGACATGGTCGATTCTGCTCGCGATCGTCTCGATCGGCACCGGGATGTCGGGCTTGGTTGCGGCTCGCGAGGC
GGAACCTGCCTGGTGGTCGCTCGCGCTGCTCGATCGCGATCGGACGTTGTGGCTGGCGACGGGGGACGGTCGGCAGCGAC
AACCGGTGGCGAACGATCTAGCTGTGTCTCGCGTGCTGTGGTCGCCGGAGGGTGGGCGGCTCGCCTTGGCCGGTGTCCAG
GACGGTACCCCGGTGATCGGGATCGTCACGACGGGAGCAGAGCCAACGACCCGGATCGTGGGCCGGGGCAGCGAGGCCAG
TTGGTCGGGCGATGGGCGGTGGCTGGCCTGGCGCGATGGGGAATCGGTCGTCATCGCGACCCGCGAGGGGAATGTGGTTC
GTTCCGTTTCAGTGGCGGCGAGGACGCTCGTCTGGTCAGCGGATGGGCGATGGCTCGCGTTCCAGCGAGCGACCGATGAA
TCGCTCGATGGACCGTGCCCTGTGATGGAGCTGGGTTGGATCGAGGCCGCCAGCGGTCGCGTCGAGATCGTCGACCGAGC
GATCGGGCAGATCACCTGGGTGGGGGTAGCTGGTGTCGCCGAGCAGCCACGGCTGGTGTATGCCGGGGCGCTCGACGCGC
GACTCCGCTGGGTCGATCCGGCGAGCGGCGCGAGCGGCGTGTTGTGGAACGGGCCGATCGAGACGTGCCGGATGCCGCTT
TTAGTCTCCGGTGACGGGCAGTGGTTGGGGTTCGTGGATGCGGTCGGAGGTGGCGACGATTTGATCTTGCTCAATCTGGT
CAGCGGGGAGGCGCGCCGCATCGTCGATGTGCCGGTAGGGTATCCAGGGAGGCAAGTGCCCTCTCCGTACGTGTGGTTGG
ACCCCCTGGCTCGCTTTCTCTACGTGAGCCGAAGTTTTCCGACTGTGGTGACGCGGATCGACCTGGTGACCGGGGAGCGC
GCGATCGCGGCGAGCGATCCGGGGATTCTCGTAGCGATCAGTCCTGAGGGTGAGCGACTGGCCTTCGTGCAGAACTCGCC
AGGGAAGCCCCCAGTGCTGGTGATCGTGGAACCGGCTACTGGTCGCCGGGAGACACTGGAGCGGATCGGCTGGGCAGCGT
GGGAACCGGCAGCCTACCAGCCAGTCGTTTTCGCTGCCTGGCAACGAACCTGGGAGCGAGAGGATCGGCCGGTCGCGGCT
GGCTCGGCAGCGCGGAGCTGGACGTGGGGGCCGCAACCGCTGCGGGTCGCGATCGAGCCGTACGTGGATGCGCCGGGCGG
CCGGCGGGCGGTGCTGTATTGGGACAAGGCGCGGATGGAGGTGACGGAGCTGGCGGCCGATCGAGGTACCCGTTGGTACG
TGACGAACGGGCTGCTGGTGCGAGAACTCATCACGGGAGCGGTCCAGGTCGGTGATGCGCTGTTCGAGCAACGGGAGCCG
GCCGCTCTTCCGGTGGCGGGTGATGCCGACGATCCCGCTGGGCCGACCTATGCGACGTTTCGTGCATTCCTCGATACTCC
GCCGCTCCCGGTGGGAGCGGAGATTCGCTGGCGGCTGCACCGCGATGGCACGGTGAGCGACGACGGTCCTGGTGGCGTCT
TCGCGGCGGTGCTCGTTCCGGAAACACACCATACGGTGGCCGATGTCTTCTGGGAGTTTCTGCAGAGCCAGGGGCTGGTC
TGGGGCGAGACCGGGCCGGTCGAGGGGAAGCTGTTCGAGCCGACGTTCTTCGCGACTGGTTTCCCGATTACCGAGCCGTA
TTGGGCAACGGTGAAGGTGGGTGGAGTAGTCCAAGACGTGCTGGTTCAATGTTTCGAGCGACGGTGCTTGACGTACACGC
CGGGCAATCCGCCGGGGTGGCGAGTGGAGATGGGGAATGTCGGGCAGCACTACCTGGCGTGGCGCGAGGGGTGGTGA

Upstream 100 bases:

>100_bases
CGAGCGAGCAACGCTGCAGGACGGTTCGGCAAACGTGGCGGGCACGCTATGGTTAGTATTCGTTTTCGGCAGTGGGGCTG
CCACGGGGAAGGGGTGCGGG

Downstream 100 bases:

>100_bases
GGCGGCGATCCAGCCGGTCGCGGTGACGGCCGCAGCGCCGCGCGGTGTCTGGGTAGTGATCGTCAACTACAACACGGCAG
GGCTGTTGGAACGCTGCCTG

Product: peptidase domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MRVTWSILLAIVSIGTGMSGLVAAREAEPAWWSLALLDRDRTLWLATGDGRQRQPVANDLAVSRVLWSPEGGRLALAGVQ
DGTPVIGIVTTGAEPTTRIVGRGSEASWSGDGRWLAWRDGESVVIATREGNVVRSVSVAARTLVWSADGRWLAFQRATDE
SLDGPCPVMELGWIEAASGRVEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRWVDPASGASGVLWNGPIETCRMPL
LVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDVPVGYPGRQVPSPYVWLDPLARFLYVSRSFPTVVTRIDLVTGER
AIAASDPGILVAISPEGERLAFVQNSPGKPPVLVIVEPATGRRETLERIGWAAWEPAAYQPVVFAAWQRTWEREDRPVAA
GSAARSWTWGPQPLRVAIEPYVDAPGGRRAVLYWDKARMEVTELAADRGTRWYVTNGLLVRELITGAVQVGDALFEQREP
AALPVAGDADDPAGPTYATFRAFLDTPPLPVGAEIRWRLHRDGTVSDDGPGGVFAAVLVPETHHTVADVFWEFLQSQGLV
WGETGPVEGKLFEPTFFATGFPITEPYWATVKVGGVVQDVLVQCFERRCLTYTPGNPPGWRVEMGNVGQHYLAWREGW

Sequences:

>Translated_638_residues
MRVTWSILLAIVSIGTGMSGLVAAREAEPAWWSLALLDRDRTLWLATGDGRQRQPVANDLAVSRVLWSPEGGRLALAGVQ
DGTPVIGIVTTGAEPTTRIVGRGSEASWSGDGRWLAWRDGESVVIATREGNVVRSVSVAARTLVWSADGRWLAFQRATDE
SLDGPCPVMELGWIEAASGRVEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRWVDPASGASGVLWNGPIETCRMPL
LVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDVPVGYPGRQVPSPYVWLDPLARFLYVSRSFPTVVTRIDLVTGER
AIAASDPGILVAISPEGERLAFVQNSPGKPPVLVIVEPATGRRETLERIGWAAWEPAAYQPVVFAAWQRTWEREDRPVAA
GSAARSWTWGPQPLRVAIEPYVDAPGGRRAVLYWDKARMEVTELAADRGTRWYVTNGLLVRELITGAVQVGDALFEQREP
AALPVAGDADDPAGPTYATFRAFLDTPPLPVGAEIRWRLHRDGTVSDDGPGGVFAAVLVPETHHTVADVFWEFLQSQGLV
WGETGPVEGKLFEPTFFATGFPITEPYWATVKVGGVVQDVLVQCFERRCLTYTPGNPPGWRVEMGNVGQHYLAWREGW
>Mature_638_residues
MRVTWSILLAIVSIGTGMSGLVAAREAEPAWWSLALLDRDRTLWLATGDGRQRQPVANDLAVSRVLWSPEGGRLALAGVQ
DGTPVIGIVTTGAEPTTRIVGRGSEASWSGDGRWLAWRDGESVVIATREGNVVRSVSVAARTLVWSADGRWLAFQRATDE
SLDGPCPVMELGWIEAASGRVEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRWVDPASGASGVLWNGPIETCRMPL
LVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDVPVGYPGRQVPSPYVWLDPLARFLYVSRSFPTVVTRIDLVTGER
AIAASDPGILVAISPEGERLAFVQNSPGKPPVLVIVEPATGRRETLERIGWAAWEPAAYQPVVFAAWQRTWEREDRPVAA
GSAARSWTWGPQPLRVAIEPYVDAPGGRRAVLYWDKARMEVTELAADRGTRWYVTNGLLVRELITGAVQVGDALFEQREP
AALPVAGDADDPAGPTYATFRAFLDTPPLPVGAEIRWRLHRDGTVSDDGPGGVFAAVLVPETHHTVADVFWEFLQSQGLV
WGETGPVEGKLFEPTFFATGFPITEPYWATVKVGGVVQDVLVQCFERRCLTYTPGNPPGWRVEMGNVGQHYLAWREGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69295; Mature: 69295

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTWSILLAIVSIGTGMSGLVAAREAEPAWWSLALLDRDRTLWLATGDGRQRQPVANDL
CEEHHHHHHHHHHHCCCCHHEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHH
AVSRVLWSPEGGRLALAGVQDGTPVIGIVTTGAEPTTRIVGRGSEASWSGDGRWLAWRDG
HEEHEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECC
ESVVIATREGNVVRSVSVAARTLVWSADGRWLAFQRATDESLDGPCPVMELGWIEAASGR
CEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECEEEECCCC
VEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRWVDPASGASGVLWNGPIETCRMPL
EEEEHHHHCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCEECCCHHHCCCCE
LVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDVPVGYPGRQVPSPYVWLDPLARFL
EECCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHH
YVSRSFPTVVTRIDLVTGERAIAASDPGILVAISPEGERLAFVQNSPGKPPVLVIVEPAT
HHCCCCCEEEEEEEEEECCEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCC
GRRETLERIGWAAWEPAAYQPVVFAAWQRTWEREDRPVAAGSAARSWTWGPQPLRVAIEP
CHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEE
YVDAPGGRRAVLYWDKARMEVTELAADRGTRWYVTNGLLVRELITGAVQVGDALFEQREP
EECCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
AALPVAGDADDPAGPTYATFRAFLDTPPLPVGAEIRWRLHRDGTVSDDGPGGVFAAVLVP
CEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEC
ETHHTVADVFWEFLQSQGLVWGETGPVEGKLFEPTFFATGFPITEPYWATVKVGGVVQDV
CCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCEEEECCCCCCCCEEEEEEECHHHHHH
LVQCFERRCLTYTPGNPPGWRVEMGNVGQHYLAWREGW
HHHHHHCCCEEECCCCCCCCEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MRVTWSILLAIVSIGTGMSGLVAAREAEPAWWSLALLDRDRTLWLATGDGRQRQPVANDL
CEEHHHHHHHHHHHCCCCHHEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHH
AVSRVLWSPEGGRLALAGVQDGTPVIGIVTTGAEPTTRIVGRGSEASWSGDGRWLAWRDG
HEEHEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECC
ESVVIATREGNVVRSVSVAARTLVWSADGRWLAFQRATDESLDGPCPVMELGWIEAASGR
CEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECEEEECCCC
VEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRWVDPASGASGVLWNGPIETCRMPL
EEEEHHHHCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCEECCCHHHCCCCE
LVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDVPVGYPGRQVPSPYVWLDPLARFL
EECCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHH
YVSRSFPTVVTRIDLVTGERAIAASDPGILVAISPEGERLAFVQNSPGKPPVLVIVEPAT
HHCCCCCEEEEEEEEEECCEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCC
GRRETLERIGWAAWEPAAYQPVVFAAWQRTWEREDRPVAAGSAARSWTWGPQPLRVAIEP
CHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEE
YVDAPGGRRAVLYWDKARMEVTELAADRGTRWYVTNGLLVRELITGAVQVGDALFEQREP
EECCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
AALPVAGDADDPAGPTYATFRAFLDTPPLPVGAEIRWRLHRDGTVSDDGPGGVFAAVLVP
CEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEC
ETHHTVADVFWEFLQSQGLVWGETGPVEGKLFEPTFFATGFPITEPYWATVKVGGVVQDV
CCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCEEEECCCCCCCCEEEEEEECHHHHHH
LVQCFERRCLTYTPGNPPGWRVEMGNVGQHYLAWREGW
HHHHHHCCCEEECCCCCCCCEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA