| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636255
Identifier: 221636255
GI number: 221636255
Start: 832346
End: 832567
Strand: Reverse
Name: 221636255
Synonym: trd_A0849
Alternate gene names: NA
Gene position: 832567-832346 (Counterclockwise)
Preceding gene: 221636256
Following gene: 221636254
Centisome position: 90.72
GC content: 63.96
Gene sequence:
>222_bases GTGGCGATCGGTCTGGCAGCGGCTGATGGCGATACCGAAATCGACACGATCGTCGCCGTGCATCGATGGGGTGAGGTGGT ACCACCGTGCGGGATGTGCCGGGAACTCATGACTGACCAGGCATCGGAAGCTCGGGTGATCGTGCCGGACGGCGGCGGTG AGACGGGCGTTGCCTTCGATTGGCTTCTACCGCTGCACGACGAGCGTCGTGTGGGTCCATGA
Upstream 100 bases:
>100_bases AAACAGGGCTGGCAGCAGATCGGTCGTGCACTGCGGACACGATCCAGAATGGTGTCCAGTGCGGTGCATCTGGAGGCGAC GATCGGTCTCTGCTGAAGCG
Downstream 100 bases:
>100_bases GTGAGCATTCGTGATCGGGTGTCCGATCGCCCACGATATTCAACGTCGCGGACGACGCGAGGAGTCTGGGGAATTCAGCG ACTTTCGGCGTTCCGGTGTC
Product: blasticidin-S deaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP
Sequences:
>Translated_73_residues MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP >Mature_72_residues AIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP
Specific function: Unknown
COG id: COG0295
COG function: function code F; Cytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7772; Mature: 7641
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFD CCEEECCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEE WLLPLHDERRVGP EEECCCCCCCCCC >Mature Secondary Structure AIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFD CEEECCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEE WLLPLHDERRVGP EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA