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The map label for this gene is hcaC [H]

Identifier: 221636244

GI number: 221636244

Start: 822639

End: 823241

Strand: Reverse

Name: hcaC [H]

Synonym: trd_A0838

Alternate gene names: 221636244

Gene position: 823241-822639 (Counterclockwise)

Preceding gene: 221636245

Following gene: 221636242

Centisome position: 89.7

GC content: 64.34

Gene sequence:

>603_bases
GTGAGCGAGGTTCGGATCACGGTTCGGCAGAATGGTCCCTATCACGTGCAAGGGCGCGTCATCTTGGTCGATCACGAGGG
AAACGAGATCCCGTACGAAGGGGAAGAGATCTGGCTGTGCCGGTGCGGCGGCTCGGCGAAGAAGCCGTTCTGTGACGGGA
CACACAAGCGCATCGGTTTCCAGGGGGATCTCGGGGTCGCGGTGCGTCGAGCGGCCGACGTTGCCGAGGAAAGAGAGCCA
GCTGCCCCTGGCGCTGCTCCCGTGCAGGAGCAAGCCAGTGAGAGCGATTTCGTGCCGGTCAAGCCGCTGGCCGAGGTGCC
CGAGGCGACGATCGTGCGCTTCGAGGTCGACGGAGCGCCGCGATTGCTCGTTCGCTTCGGGGAACGGCTTTATGCGGTCG
ACGGCATCTGCACGCACGAAGAGGCAGAACTGGCCGAGGGGGATCTGGAGGATGGCGTGATCTATTGTCCCTTGCATGGC
TCGGGGTTCGAGTTGGCGACCGGACGAGTCACCAGTCTCCCGGCGACCAAACCGTTGCCGGTCTACGAGGTGGTCGTACG
GGATGGGATGGTGTACGTTTCACGCCAGCCGCGCGGTCGGTGA

Upstream 100 bases:

>100_bases
TGGGTCGTCGCAGTTCACGGCTTCGTCTCGTCGGTACCGTTCTGCAACGCTATAGTTGCGTTGAAGGCCAATAGGGATCG
ATCGCCCCGGAGGGTAAGCG

Downstream 100 bases:

>100_bases
AGGCTGAGGCCGAAGCACGGATCTTCCGGCAGGGTGGTCATGGGCCAGGAGCAGAGGCTCCTCGGCGATCGGTGTCACCG
TTGGGCAGGGAGATCATACC

Product: rieske

Products: NA

Alternate protein names: Digoxigenin ferredoxin subunit [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSEVRITVRQNGPYHVQGRVILVDHEGNEIPYEGEEIWLCRCGGSAKKPFCDGTHKRIGFQGDLGVAVRRAADVAEEREP
AAPGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAPRLLVRFGERLYAVDGICTHEEAELAEGDLEDGVIYCPLHG
SGFELATGRVTSLPATKPLPVYEVVVRDGMVYVSRQPRGR

Sequences:

>Translated_200_residues
MSEVRITVRQNGPYHVQGRVILVDHEGNEIPYEGEEIWLCRCGGSAKKPFCDGTHKRIGFQGDLGVAVRRAADVAEEREP
AAPGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAPRLLVRFGERLYAVDGICTHEEAELAEGDLEDGVIYCPLHG
SGFELATGRVTSLPATKPLPVYEVVVRDGMVYVSRQPRGR
>Mature_199_residues
SEVRITVRQNGPYHVQGRVILVDHEGNEIPYEGEEIWLCRCGGSAKKPFCDGTHKRIGFQGDLGVAVRRAADVAEEREPA
APGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAPRLLVRFGERLYAVDGICTHEEAELAEGDLEDGVIYCPLHGS
GFELATGRVTSLPATKPLPVYEVVVRDGMVYVSRQPRGR

Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP- dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively. This protein se

COG id: COG3369

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 21822; Mature: 21691

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVRITVRQNGPYHVQGRVILVDHEGNEIPYEGEEIWLCRCGGSAKKPFCDGTHKRIGF
CCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECC
QGDLGVAVRRAADVAEEREPAAPGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEEEECCCC
RLLVRFGERLYAVDGICTHEEAELAEGDLEDGVIYCPLHGSGFELATGRVTSLPATKPLP
HHHHHHCCCEEEECCEECCCCCHHCCCCCCCCEEEEEECCCCCEEECCEEEECCCCCCCC
VYEVVVRDGMVYVSRQPRGR
HHEEEECCCEEEEECCCCCC
>Mature Secondary Structure 
SEVRITVRQNGPYHVQGRVILVDHEGNEIPYEGEEIWLCRCGGSAKKPFCDGTHKRIGF
CCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECC
QGDLGVAVRRAADVAEEREPAAPGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEEEECCCC
RLLVRFGERLYAVDGICTHEEAELAEGDLEDGVIYCPLHGSGFELATGRVTSLPATKPLP
HHHHHHCCCEEEECCEECCCCCHHCCCCCCCCEEEEEECCCCCEEECCEEEECCCCCCCC
VYEVVVRDGMVYVSRQPRGR
HHEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA