| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636220
Identifier: 221636220
GI number: 221636220
Start: 800663
End: 801670
Strand: Reverse
Name: 221636220
Synonym: trd_A0814
Alternate gene names: NA
Gene position: 801670-800663 (Counterclockwise)
Preceding gene: 221636221
Following gene: 221636219
Centisome position: 87.35
GC content: 67.16
Gene sequence:
>1008_bases ATGCTGTCCGGCATACGTCGCCTCGTCCTCGTGGGGATGGTGATTTTGGCCGCGGTGCCGTTCGGCTCGGCCGCCGCACC GCCGAGCGCGTGCTTGGCGGTAGGTGACTCGCTCGCTGCCGGTGTGGGAAGTACGTTGCCGCGAGAACGAAGTGCGGCCG CGCTGCTCTGCGAGTGGGCGAGCACCTACTGGGGGGAGAAGAGCGAGCTCGTGAGTCTCGCGGTGCCGGGAGAACGCACC GAATCGTTTCTGCGCGGTGGGCAAGCGGAACGACTGCGCCAGACGGTGGCTCGCCTGCGAGCAGAGGGGCGGGCGATCCG CTTCGTGCTGATCAGTCTGGGTGGGAACGATCTTCTCCAACTCCGAGCCGCCGATGAGGTCGAACGGGAGGAGCAACTTG CAGCCTTCGAGGCGAACTATGCCGAGGCGATGCGGGTGATCCGCAGCGCTGTCGGCGATGTTCCGCTCCTGGCCCTCACG CTCTACGACCCGACCGAAGGGGATGCCAGGGCACCGCGGAGCGACAGCTGGTGGATCGCGCAGTTCGATCGGGCGATCCG AGCTGGTGCGGAGTCAGTCGGGGCGCTCGTGGTCGATCTGGACAAGGAGTTCCGGGGCCGGACGGGCGAGTGGACCTGGT GGCCGGTCGATATCCATCCGACCAACGCGGGATATGCAGCGATCGCTCGTGCGGCGTGGCGAGCGCTCGCCTGGGATCGC CAGGCACCACAGGTGGTGATCGAGCGGCCAGAGGCAGGAAGCCGTGTGGAGAGGCGGTTCCTGACCGTGCGGGCACGAAT CAGCGATCTCGGCGGGATCGAACGCGTCGGGTTGTGGGTGGACGGGCAGGAGATCGGTACCCTCGATCCATTGCCGGGGG CCGACGAATGGATCACACTGTGGGAGACGCCGTGGCCGTTACCAGGCCCACCGCTCCGACTCGAAGTCCGTGCTGTCGAT CGAGCAGGCAACGAGGGCCGGGCAGCAGTGGAACTCGTGCGACCATGA
Upstream 100 bases:
>100_bases ACGTGGAGGAGGCGCTGGCAGCGCTCAGTCACGAGGAAGTACGCGAGTTGGTCGCGACGACGATGCGTCGCATCGGGGTT CCTGTCGGAACGAGCCGATG
Downstream 100 bases:
>100_bases GTGGGGCGACGACGAAACGACCGGGAAACGACTCGCTCGGTCCCGATTTGGAAGGGCGCTTGGGAGCGTTCACGCTTTCC GATCTTCTCCAGATGATCGG
Product: lipolytic enzyme, G-D-S-L
Products: NA
Alternate protein names: Lipolytic G-D-S-L; Lipolytic Protein G-D-S-L Family
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD RAGNEGRAAVELVRP
Sequences:
>Translated_335_residues MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD RAGNEGRAAVELVRP >Mature_335_residues MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD RAGNEGRAAVELVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36497; Mature: 36497
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWA CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHH STYWGEKSELVSLAVPGERTESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQ HHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEE LRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALTLYDPTEGDARAPRSDSWWIA EECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH QFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR HHHHHHHHCHHHHCEEEEEECHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITL CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE WETPWPLPGPPLRLEVRAVDRAGNEGRAAVELVRP ECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWA CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHH STYWGEKSELVSLAVPGERTESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQ HHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEE LRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALTLYDPTEGDARAPRSDSWWIA EECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH QFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR HHHHHHHHCHHHHCEEEEEECHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITL CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE WETPWPLPGPPLRLEVRAVDRAGNEGRAAVELVRP ECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA