Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

Click here to switch to the map view.

The map label for this gene is 221636187

Identifier: 221636187

GI number: 221636187

Start: 764830

End: 765063

Strand: Reverse

Name: 221636187

Synonym: trd_A0781

Alternate gene names: NA

Gene position: 765063-764830 (Counterclockwise)

Preceding gene: 221636194

Following gene: 221636186

Centisome position: 83.36

GC content: 64.96

Gene sequence:

>234_bases
ATGGCCGCGCGGGCATACGTCCTGGTTCACTGCGATGTCGGGAAGGCTCGTTCCGTCAAAGAGGCGCTGGCGAGCGTCCC
CGGCGTCCTGCATGCCGACATCGTGACGGGTGATTACGACCTCATCGTGGTGGTCGAGCAACCGACGGTCGAGGAACTGG
GGCGGCTCGTTCTCGAGAAGATCCACGGTACGCCCGGCGTGACGGCGACGAGTACGCATGTGGTGGTGGGGTAG

Upstream 100 bases:

>100_bases
GCCGGAGCAGTGGGAGACGACGCGCGAGGCGTCGTCTTGTTGCCGACTCGCCGTTGGGGCACACTAACCGCGAGTTCCGT
TCAAGAAGGGAGGGAGCCTC

Downstream 100 bases:

>100_bases
ACGCGGTCAACGACGCGATCGCTGGCAGTCGGTCGCCGATGCCGGCAAGCCGACCTCGCTCGCGGGCAGACGCGTGGCTG
CATCGTTCGGCATTGTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AsnC Family; AsnC Family Transcriptional Regulatory Protein

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MAARAYVLVHCDVGKARSVKEALASVPGVLHADIVTGDYDLIVVVEQPTVEELGRLVLEKIHGTPGVTATSTHVVVG

Sequences:

>Translated_77_residues
MAARAYVLVHCDVGKARSVKEALASVPGVLHADIVTGDYDLIVVVEQPTVEELGRLVLEKIHGTPGVTATSTHVVVG
>Mature_76_residues
AARAYVLVHCDVGKARSVKEALASVPGVLHADIVTGDYDLIVVVEQPTVEELGRLVLEKIHGTPGVTATSTHVVVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8059; Mature: 7928

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARAYVLVHCDVGKARSVKEALASVPGVLHADIVTGDYDLIVVVEQPTVEELGRLVLEK
CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
IHGTPGVTATSTHVVVG
HCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
AARAYVLVHCDVGKARSVKEALASVPGVLHADIVTGDYDLIVVVEQPTVEELGRLVLEK
CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
IHGTPGVTATSTHVVVG
HCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA