Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636151

Identifier: 221636151

GI number: 221636151

Start: 733470

End: 735029

Strand: Reverse

Name: 221636151

Synonym: trd_A0745

Alternate gene names: NA

Gene position: 735029-733470 (Counterclockwise)

Preceding gene: 221636152

Following gene: 221636149

Centisome position: 80.09

GC content: 66.73

Gene sequence:

>1560_bases
ATGAGGAAATGCGCGGCTCACGAGTGGATATCCGTTTTTGCGTATCCTCGTGGTCGGCACGTTGGCTCACTCGGTTCTCC
GGCAGGACGGCGTTGCGGTTCGCCGCGAGAGATCCGGAATGGAGTCGAGGTCGATGCGGGTGTGACGCGCACCGGCTGTC
CGATGACCCGGGCACCGTTTGCCGTCACGATGGAGGCGCGCAGCGACCAACCGGCGCAGTGCGGACTGGATGCTGCTCCT
CACCAGGAGAAGCGATCGTGCGTGGCAGAGCGGAGACGGTCGGTGAAGGGGGTTGGAGCGATGGACGAGCAGGGGAACGC
TGAGGGGTTGGTGCGCGAGGCAACGCGCTTTTCAGCGGAGCGACCACACTGGGTTCGGCCCAGTTACGACGGGTTCGGCC
TCGTCAACCTGCCATGGTCGATCCTGGCCAGCCTGGGGGGCGAGCTGGAGGGGCAGCCGGTTTCTCCAGCGATCTGGCCG
AGCGAGTTGGCCGATGGGATCGAGGCTGTTCTGCTCGTGATCATCGATGGACTGGGTTACGAACGGCTGCAGCGCGCGCT
GGCGGAGGGAGAGACGCCCGGGCTGGCCAGATTGGCGCGTGAGGGCATACTCTTCCCGCTCACCTCGGTCTTCCCCTCGA
CGACTGTCGCGGCGTTGACGACGCTGGCGACCGGTTACCCGCCGAGTCAGCATGGCTTGCTCGGCTTCACGGTCTTTCTG
CGCGAGTTCGGCATGCTCTCCAATCTCCTGCTCTGGTCGCCGCTCGGGCGATTTCCCAGCTACGCGAGCCTGGGGCTGGA
ACCACGCTCGTTCCTGCCTGTTCCGACGATCGCCGAGCGAGCCGCGCGAGCCGGCATCCACGCGACGGTGGTGAGCCCGG
AGGCGTTTCGCGACACGCCCCTGACCAAGATGCAGGCGGCTGGTGCCGAATTCCGCGGATATCGGACACCCGGCGAGTTC
GTGGCGCAGGTTCACGCTGCGCTCGTCCGGCCGGGTCGCCAGTTGGTGACGGCCTATTGGGATACGCTGGACACGCTGGG
CCACTTCGTGGGGCCGGAATCAGCGGCCTGGCGTATCGAGTTCCGGCAGTTCGATCGCTTGCTGGCCGACGAGCTCCTGG
CTCGACTCCCGCGGCGTAACCTGCTCGTCGTCATCACCGCCGATCACGGGATGGTCTCCCTGGATCCAGCGCGGCAACGA
CCGCTCACCGATCCCGCACTGCTGGCCGAACTGCGGGTCCCGCCGGCTGGCGAGCGTCGCGCCGTCTATCTGCACCCGGT
GACCGGCGCAGAAGAGTCCGTACAGGCGCGCCTGACAGCGCTGGCGGGCGAGGACGGATGGGTGTCCAGTCGAGACGAGC
TCTTCGCGCAGGGGCTGTTCGGTCCCCTGCCGTACCATCCGGAAGCGCTGCATCGGGTGGGTGAACTGGTCCTGATCGCA
GTCGAGGGAGCGGGTTTCCCGTGGGATCCACCTGGGGCATCAAGTCGCGTCTTTCTCGGGGCACATGCCGGGCTGGAAGC
GGTCGAGCAACTGGTGCCGTGTCTGATCTGGCGTCCGTGA

Upstream 100 bases:

>100_bases
AGAGCGCCGAACTCCCGCGGCTTCTCGAAGCGAGCGGTGCGGACGTAACTGAGGACCGAACTGCTCGGGCGGATCGGGAA
CTGGCACCGACGAACTGTCG

Downstream 100 bases:

>100_bases
GCCGTCACAGTTGGAGCCAGATAGCGAGCGAGCCGGCTGCCAGGAGAAGGGGGACGAGGAGGAACCCGAGCAGGATGTAC
TGGCGGACTGAAACCGTGAT

Product: type I phosphodiesterase/nucleotide pyrophosphatase

Products: NA

Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Phosphodiesterase/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase; Truncated Phosphodiesterase; Phosphodiesterase Protein; Protein Of AP Superfamily

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MRKCAAHEWISVFAYPRGRHVGSLGSPAGRRCGSPREIRNGVEVDAGVTRTGCPMTRAPFAVTMEARSDQPAQCGLDAAP
HQEKRSCVAERRRSVKGVGAMDEQGNAEGLVREATRFSAERPHWVRPSYDGFGLVNLPWSILASLGGELEGQPVSPAIWP
SELADGIEAVLLVIIDGLGYERLQRALAEGETPGLARLAREGILFPLTSVFPSTTVAALTTLATGYPPSQHGLLGFTVFL
REFGMLSNLLLWSPLGRFPSYASLGLEPRSFLPVPTIAERAARAGIHATVVSPEAFRDTPLTKMQAAGAEFRGYRTPGEF
VAQVHAALVRPGRQLVTAYWDTLDTLGHFVGPESAAWRIEFRQFDRLLADELLARLPRRNLLVVITADHGMVSLDPARQR
PLTDPALLAELRVPPAGERRAVYLHPVTGAEESVQARLTALAGEDGWVSSRDELFAQGLFGPLPYHPEALHRVGELVLIA
VEGAGFPWDPPGASSRVFLGAHAGLEAVEQLVPCLIWRP

Sequences:

>Translated_519_residues
MRKCAAHEWISVFAYPRGRHVGSLGSPAGRRCGSPREIRNGVEVDAGVTRTGCPMTRAPFAVTMEARSDQPAQCGLDAAP
HQEKRSCVAERRRSVKGVGAMDEQGNAEGLVREATRFSAERPHWVRPSYDGFGLVNLPWSILASLGGELEGQPVSPAIWP
SELADGIEAVLLVIIDGLGYERLQRALAEGETPGLARLAREGILFPLTSVFPSTTVAALTTLATGYPPSQHGLLGFTVFL
REFGMLSNLLLWSPLGRFPSYASLGLEPRSFLPVPTIAERAARAGIHATVVSPEAFRDTPLTKMQAAGAEFRGYRTPGEF
VAQVHAALVRPGRQLVTAYWDTLDTLGHFVGPESAAWRIEFRQFDRLLADELLARLPRRNLLVVITADHGMVSLDPARQR
PLTDPALLAELRVPPAGERRAVYLHPVTGAEESVQARLTALAGEDGWVSSRDELFAQGLFGPLPYHPEALHRVGELVLIA
VEGAGFPWDPPGASSRVFLGAHAGLEAVEQLVPCLIWRP
>Mature_519_residues
MRKCAAHEWISVFAYPRGRHVGSLGSPAGRRCGSPREIRNGVEVDAGVTRTGCPMTRAPFAVTMEARSDQPAQCGLDAAP
HQEKRSCVAERRRSVKGVGAMDEQGNAEGLVREATRFSAERPHWVRPSYDGFGLVNLPWSILASLGGELEGQPVSPAIWP
SELADGIEAVLLVIIDGLGYERLQRALAEGETPGLARLAREGILFPLTSVFPSTTVAALTTLATGYPPSQHGLLGFTVFL
REFGMLSNLLLWSPLGRFPSYASLGLEPRSFLPVPTIAERAARAGIHATVVSPEAFRDTPLTKMQAAGAEFRGYRTPGEF
VAQVHAALVRPGRQLVTAYWDTLDTLGHFVGPESAAWRIEFRQFDRLLADELLARLPRRNLLVVITADHGMVSLDPARQR
PLTDPALLAELRVPPAGERRAVYLHPVTGAEESVQARLTALAGEDGWVSSRDELFAQGLFGPLPYHPEALHRVGELVLIA
VEGAGFPWDPPGASSRVFLGAHAGLEAVEQLVPCLIWRP

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56252; Mature: 56252

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKCAAHEWISVFAYPRGRHVGSLGSPAGRRCGSPREIRNGVEVDAGVTRTGCPMTRAPF
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHCCCEECCCCCCCCCCCCCCCE
AVTMEARSDQPAQCGLDAAPHQEKRSCVAERRRSVKGVGAMDEQGNAEGLVREATRFSAE
EEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
RPHWVRPSYDGFGLVNLPWSILASLGGELEGQPVSPAIWPSELADGIEAVLLVIIDGLGY
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
ERLQRALAEGETPGLARLAREGILFPLTSVFPSTTVAALTTLATGYPPSQHGLLGFTVFL
HHHHHHHHCCCCCHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
REFGMLSNLLLWSPLGRFPSYASLGLEPRSFLPVPTIAERAARAGIHATVVSPEAFRDTP
HHHHHHHHHHHHCCHHCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCC
LTKMQAAGAEFRGYRTPGEFVAQVHAALVRPGRQLVTAYWDTLDTLGHFVGPESAAWRIE
CHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH
FRQFDRLLADELLARLPRRNLLVVITADHGMVSLDPARQRPLTDPALLAELRVPPAGERR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECHHHCCCCCCHHHHHHCCCCCCCCCC
AVYLHPVTGAEESVQARLTALAGEDGWVSSRDELFAQGLFGPLPYHPEALHRVGELVLIA
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEE
VEGAGFPWDPPGASSRVFLGAHAGLEAVEQLVPCLIWRP
EECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKCAAHEWISVFAYPRGRHVGSLGSPAGRRCGSPREIRNGVEVDAGVTRTGCPMTRAPF
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHCCCEECCCCCCCCCCCCCCCE
AVTMEARSDQPAQCGLDAAPHQEKRSCVAERRRSVKGVGAMDEQGNAEGLVREATRFSAE
EEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
RPHWVRPSYDGFGLVNLPWSILASLGGELEGQPVSPAIWPSELADGIEAVLLVIIDGLGY
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
ERLQRALAEGETPGLARLAREGILFPLTSVFPSTTVAALTTLATGYPPSQHGLLGFTVFL
HHHHHHHHCCCCCHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
REFGMLSNLLLWSPLGRFPSYASLGLEPRSFLPVPTIAERAARAGIHATVVSPEAFRDTP
HHHHHHHHHHHHCCHHCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCC
LTKMQAAGAEFRGYRTPGEFVAQVHAALVRPGRQLVTAYWDTLDTLGHFVGPESAAWRIE
CHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH
FRQFDRLLADELLARLPRRNLLVVITADHGMVSLDPARQRPLTDPALLAELRVPPAGERR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECHHHCCCCCCHHHHHHCCCCCCCCCC
AVYLHPVTGAEESVQARLTALAGEDGWVSSRDELFAQGLFGPLPYHPEALHRVGELVLIA
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEE
VEGAGFPWDPPGASSRVFLGAHAGLEAVEQLVPCLIWRP
EECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA