| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636126
Identifier: 221636126
GI number: 221636126
Start: 712841
End: 713194
Strand: Reverse
Name: 221636126
Synonym: trd_A0720
Alternate gene names: NA
Gene position: 713194-712841 (Counterclockwise)
Preceding gene: 221636127
Following gene: 221636125
Centisome position: 77.71
GC content: 61.86
Gene sequence:
>354_bases GTGCACCTCACTGACAACGTACGCCTTGAGGCGCTCGAACAGATCCATCTCAAGAAGAAGCGTCCGGGGCAACCGCGAGC GGTCCAAGAAGTCAAGGCCGGCGATGAAATTTTCCACAAGACCGGCGAGCGGCATAGGCTCGTGCGGGTGATCGGTCGTG AACAGGATCGGTATTACGAGCACATCGAGGACTCGTTGGGGAATGTGATCCGGCATGTCGAGGAGCCCTTGACGCAGCAC CGTGACCGCGGATACGTCAAGAAGAAGCGTCATCCCAGCGAGCGGAGCGTCCCTCCGGCCGGGCAAGACCTGAGCAGCGA TTCCGAGTCCTCGCGCGAGCGGGGAGCGCGCTGA
Upstream 100 bases:
>100_bases CCGCATCTCGACACCGGGGTCGATCCGTTGCTCCGACTGCGGCGAGGAGCTGGACGCGCAGGCTGACGCGTGCCCACGAT GCGGGTCGAGGAACCGAACG
Downstream 100 bases:
>100_bases CTGGAGGCAGGCCGCTGCCGGTCATCCCGGCGGGTGGCCAGCAGCGAGGCGCTCACCAGCGGCCACGTGGTCATCGAGAG GCGAGGAGGAAGGGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MHLTDNVRLEALEQIHLKKKRPGQPRAVQEVKAGDEIFHKTGERHRLVRVIGREQDRYYEHIEDSLGNVIRHVEEPLTQH RDRGYVKKKRHPSERSVPPAGQDLSSDSESSRERGAR
Sequences:
>Translated_117_residues MHLTDNVRLEALEQIHLKKKRPGQPRAVQEVKAGDEIFHKTGERHRLVRVIGREQDRYYEHIEDSLGNVIRHVEEPLTQH RDRGYVKKKRHPSERSVPPAGQDLSSDSESSRERGAR >Mature_117_residues MHLTDNVRLEALEQIHLKKKRPGQPRAVQEVKAGDEIFHKTGERHRLVRVIGREQDRYYEHIEDSLGNVIRHVEEPLTQH RDRGYVKKKRHPSERSVPPAGQDLSSDSESSRERGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13646; Mature: 13646
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTDNVRLEALEQIHLKKKRPGQPRAVQEVKAGDEIFHKTGERHRLVRVIGREQDRYYE CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH HIEDSLGNVIRHVEEPLTQHRDRGYVKKKRHPSERSVPPAGQDLSSDSESSRERGAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MHLTDNVRLEALEQIHLKKKRPGQPRAVQEVKAGDEIFHKTGERHRLVRVIGREQDRYYE CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH HIEDSLGNVIRHVEEPLTQHRDRGYVKKKRHPSERSVPPAGQDLSSDSESSRERGAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA