Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636122

Identifier: 221636122

GI number: 221636122

Start: 707073

End: 708059

Strand: Reverse

Name: 221636122

Synonym: trd_A0716

Alternate gene names: NA

Gene position: 708059-707073 (Counterclockwise)

Preceding gene: 221636124

Following gene: 221636120

Centisome position: 77.15

GC content: 65.96

Gene sequence:

>987_bases
ATGGCGCGGCGAGGCTGGTTTCTGGTGCTCGGGGCGATCGCGCTGGTGTGTGGTTGTCTGTCCGTCGGTGTGATCGGAGC
AGCTGGCCTGTGGTTCCTGACGCGCGGCCAGGGGTCGCCGACACCGGGGATCGCGGCGAACGTCACCCCGGCGCTCCGCC
GGACGAACGTGGAGCGGAATCAGCTCGCGAACGGCTGGCAGCGGGTGTCCGATGGGCAACGTGTCGCCTACCTGGCGCCC
GCGCAGGGGAATCTGCCGTTCCAGCCAGGACTCTTCTGGCAGGCGGAGCCGCTCCCGCAGCCGCTCAATCCGTTGCAGTA
CGCGGCGGTCGTCTACTTGCGCCTGCAACAGCAGAGCGAGCAACTCTATGCGTACCATGCGCAGTGGGTGTCCTTTGCCG
GTTGGCCGGCGATCGAGTTGGCCTACGCAGCGGTCCAGAACGGACAGCCCTACGAGGCGGTGCTCTGGATCTTGAGCGAT
GGCTGGACCGGGTACATCGTCAGTTTCATCGCTCCCTATGGGCTCCTGGACGAGTACGTGCCCCAGCTCCCGCAGGTACT
GCAGGACGCCGAACAGCAACTGATCGAGCAGCCGGGGCCGCTCCAGGGTGGGCCGGTGCCAGACGTCTGGGTCGCTGGTG
GCGGGATGGGGTACGGCGGCGAGATGACGCCCGCCTGGGACTGGAGTGGATTCGATTACGGCACGCCTCTGTACGGCTTC
CAGGACCCGTTCGCTGATGTCGGCTGGGACAGCGGTGGCTACGACTTCTCCGGCGACCTGTACAGCGACTTGTACTCGAG
CGGTGGCGGTCTCTACGACCCCGAGCACGATGCCTTCAATACCTGGATGGCCGAAGAGTGGAGCCAGGCGTTGAGCGGCG
AAAATCCTGACCCGACCTGGATGGACGACGCCGGCAATCTCTACTGGGAGGGGCCGTCCGGCACGCTCCACGATTGGAGC
GCCGATTACGATCCCTCGATCTGGTGA

Upstream 100 bases:

>100_bases
AGCCAGCGACCCCTGGAGCAGGACCGTGCGCTGCAGTAGACTGCAGGCAGCGAAGAGGCGAGTGATCGTTTTTCAGACGA
CAGAACCCGGGGGATGAGCC

Downstream 100 bases:

>100_bases
GCGCGGGACGATCCGCTCAGCGACGTGCCGTGGGCGATGCCCGGGACGGACCATCGGCGGGCTGCGAGTCGGAGGACGCT
CCCGACGCTCGGTCGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MARRGWFLVLGAIALVCGCLSVGVIGAAGLWFLTRGQGSPTPGIAANVTPALRRTNVERNQLANGWQRVSDGQRVAYLAP
AQGNLPFQPGLFWQAEPLPQPLNPLQYAAVVYLRLQQQSEQLYAYHAQWVSFAGWPAIELAYAAVQNGQPYEAVLWILSD
GWTGYIVSFIAPYGLLDEYVPQLPQVLQDAEQQLIEQPGPLQGGPVPDVWVAGGGMGYGGEMTPAWDWSGFDYGTPLYGF
QDPFADVGWDSGGYDFSGDLYSDLYSSGGGLYDPEHDAFNTWMAEEWSQALSGENPDPTWMDDAGNLYWEGPSGTLHDWS
ADYDPSIW

Sequences:

>Translated_328_residues
MARRGWFLVLGAIALVCGCLSVGVIGAAGLWFLTRGQGSPTPGIAANVTPALRRTNVERNQLANGWQRVSDGQRVAYLAP
AQGNLPFQPGLFWQAEPLPQPLNPLQYAAVVYLRLQQQSEQLYAYHAQWVSFAGWPAIELAYAAVQNGQPYEAVLWILSD
GWTGYIVSFIAPYGLLDEYVPQLPQVLQDAEQQLIEQPGPLQGGPVPDVWVAGGGMGYGGEMTPAWDWSGFDYGTPLYGF
QDPFADVGWDSGGYDFSGDLYSDLYSSGGGLYDPEHDAFNTWMAEEWSQALSGENPDPTWMDDAGNLYWEGPSGTLHDWS
ADYDPSIW
>Mature_327_residues
ARRGWFLVLGAIALVCGCLSVGVIGAAGLWFLTRGQGSPTPGIAANVTPALRRTNVERNQLANGWQRVSDGQRVAYLAPA
QGNLPFQPGLFWQAEPLPQPLNPLQYAAVVYLRLQQQSEQLYAYHAQWVSFAGWPAIELAYAAVQNGQPYEAVLWILSDG
WTGYIVSFIAPYGLLDEYVPQLPQVLQDAEQQLIEQPGPLQGGPVPDVWVAGGGMGYGGEMTPAWDWSGFDYGTPLYGFQ
DPFADVGWDSGGYDFSGDLYSDLYSSGGGLYDPEHDAFNTWMAEEWSQALSGENPDPTWMDDAGNLYWEGPSGTLHDWSA
DYDPSIW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35958; Mature: 35827

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRGWFLVLGAIALVCGCLSVGVIGAAGLWFLTRGQGSPTPGIAANVTPALRRTNVERN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHH
QLANGWQRVSDGQRVAYLAPAQGNLPFQPGLFWQAEPLPQPLNPLQYAAVVYLRLQQQSE
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLYAYHAQWVSFAGWPAIELAYAAVQNGQPYEAVLWILSDGWTGYIVSFIAPYGLLDEYV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
PQLPQVLQDAEQQLIEQPGPLQGGPVPDVWVAGGGMGYGGEMTPAWDWSGFDYGTPLYGF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QDPFADVGWDSGGYDFSGDLYSDLYSSGGGLYDPEHDAFNTWMAEEWSQALSGENPDPTW
CCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
MDDAGNLYWEGPSGTLHDWSADYDPSIW
CCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRGWFLVLGAIALVCGCLSVGVIGAAGLWFLTRGQGSPTPGIAANVTPALRRTNVERN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHH
QLANGWQRVSDGQRVAYLAPAQGNLPFQPGLFWQAEPLPQPLNPLQYAAVVYLRLQQQSE
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLYAYHAQWVSFAGWPAIELAYAAVQNGQPYEAVLWILSDGWTGYIVSFIAPYGLLDEYV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
PQLPQVLQDAEQQLIEQPGPLQGGPVPDVWVAGGGMGYGGEMTPAWDWSGFDYGTPLYGF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QDPFADVGWDSGGYDFSGDLYSDLYSSGGGLYDPEHDAFNTWMAEEWSQALSGENPDPTW
CCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
MDDAGNLYWEGPSGTLHDWSADYDPSIW
CCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA