| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636095
Identifier: 221636095
GI number: 221636095
Start: 677026
End: 678045
Strand: Reverse
Name: 221636095
Synonym: trd_A0689
Alternate gene names: NA
Gene position: 678045-677026 (Counterclockwise)
Preceding gene: 221636096
Following gene: 221636094
Centisome position: 73.88
GC content: 70.59
Gene sequence:
>1020_bases ATGCAGTGGGTGTTGGCCTACGACGGAGCTTGCGGGCGTTGCCGGGCGCTCGCCGAGCGGGTGGTCGCGCTGGGGGCGGG GCGGCTGGTGGCGCGGAGCCTGCGCGACCCGGAGGTGGCGGCCTGGCGGGAGCGGCTCTTGGGGGCCGGGGCGCCGTGGG AGCCGGTGCTCTTTGCGGTGGAGGGGGAGGGAGCGGTCCGGGCACTGACCGGGCGGCGGCTGGTGCTCGAGCTCGTACGG CTGCTGGGGGTGCGGCGGGGGCTGGCACTGGCGAGGGAGCTAGGGGACCTGGCTTCGCCAGCGGGAGCGGGTCCGGTGCT GACGCGGCGGCGAGTACTCGGGCGGCTGGCTGGACTCGGCGCCGCGCTCGGGCTTCTGGTGAGCGGGAAGCTGGCGGTGC CGGGTGGGGTGCATGCCCAGGGAGCGGGGGAAGAGCGCCCGTGGTGGGCGGTGGAGCCGATAAAGACGAGCCTGCTCGAT CCGGCAGCTGGGGAGAAACTCCTGGCGGAGCTCGTGGCCGGGCCTGACCTTCGGGCAGTACTCGGTGCGGCAGAGCTGGC CGAGGTGCAGGCAGCCGAGCACCGGCTGGCCGACGGGCGGACGCTGTGGGCCCTGGCGGGGGTGCTGCCCGACGACGAGG TGGTGGTGGCGTACCGGGACGACGCAGGGCGAATTGAAGCGCTGCGCTACCGCGTGGTAGGGGAGGTCGCCGAGCTGCGG GCGGTGAGTGCGGGTGGGGTGGTGCAGTATCCGGCGGGCGCTGGTGGGGGTGACTTCGGGTTGGCCGGCTGCCCACCGGG TTACTGGCCCTGCCAGCGATGTTGCGGTGTTAATCTGCGCGAGATCGAAAATAGATGTGCGGGCTGTTGGGTCCCTTGCT TGTCCTGTGCGTTTATCCGGACTGTTGAAGGGTGTACCCCGTGTCTCATTTGTCTGTTCGTCTTTTGTCCCTATGTGGTG TACCAGGCTTGCCGCTTTTGTCGGACTTGCTGTCCCGAGTCACCACCTTGGGGGCCATAG
Upstream 100 bases:
>100_bases GGCCGGATGACAGCGCTGTCATCCAAAGGTGACTGGAAAGAGCACCCGACCCGGTGGGATAGTGGCAATAGACACGGTAT CACTCGAAGGAGGTCTGCGC
Downstream 100 bases:
>100_bases GGGGTTGCGATGGGGCTTGGCGCGCTCCTCTTGATCATCGTCTGGGTTGTCTGCTTCGTCTATCTGGGCATGCTCGTCGT GCAGATGGTCCGTGCGCGAC
Product: Tat (twin-arginine translocation) pathway signal sequence domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV YQACRFCRTCCPESPPWGP
Sequences:
>Translated_339_residues MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV YQACRFCRTCCPESPPWGP >Mature_339_residues MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV YQACRFCRTCCPESPPWGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35797; Mature: 35797
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAV CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE EGEGAVRALTGRRLVLELVRLLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLG ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLDPAAGEKLLAELVAGPDLRAV HHHHHHHCCCEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHH LGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR HHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIR HHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TVEGCTPCLICLFVFCPYVVYQACRFCRTCCPESPPWGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAV CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE EGEGAVRALTGRRLVLELVRLLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLG ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLDPAAGEKLLAELVAGPDLRAV HHHHHHHCCCEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHH LGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR HHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIR HHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TVEGCTPCLICLFVFCPYVVYQACRFCRTCCPESPPWGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA