Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636093

Identifier: 221636093

GI number: 221636093

Start: 676019

End: 676336

Strand: Reverse

Name: 221636093

Synonym: trd_A0687

Alternate gene names: NA

Gene position: 676336-676019 (Counterclockwise)

Preceding gene: 221636094

Following gene: 221636092

Centisome position: 73.7

GC content: 69.18

Gene sequence:

>318_bases
ATGTGGGAGCAGTGGTACCCGATCTACTCAGCCATCTGCTATTTCGGTAGCCTCGGGCTCCTGTCGCTGGTTCACGTGCG
CTGGGTGGCGCGGCGCTTTCGGCAGTTCCGGAAATTGGACTGGGCGTACGAGCTCGTCGTGACATGGCTGCTCGCGGTTG
CCTGGTGGCACGGGATGCGGCAGGGGCCGGTCTGGGATACGGAGTTGCCGGGGAGTCCGCTCGGGGTGCGCGGGGCGCTC
GCGCTGGCAGCGGTGGTGGTAGCGGTGGCAGCGGGGTGGCGGCTCGAACAGCGTTCCCGCGCGCCGGGGGTGGCCTAG

Upstream 100 bases:

>100_bases
CAGCTGTGTATTCCGGTCCTGCGTGTGGTGGTGCAATTGTTGTTGGAACGATCCACCCTGGGGGCCGTGAGCGGAATGTT
GCAGTGGAGGAATCGGGACG

Downstream 100 bases:

>100_bases
GTCACCTGGCGAGGGCTTGGCTCGTCCCGGTCGGGGCGGGGGAGGCGAGCGGGGAGCGTGGGTTGCCTAGACTGCGACGG
GACTCGTGCGAGTTGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MWEQWYPIYSAICYFGSLGLLSLVHVRWVARRFRQFRKLDWAYELVVTWLLAVAWWHGMRQGPVWDTELPGSPLGVRGAL
ALAAVVVAVAAGWRLEQRSRAPGVA

Sequences:

>Translated_105_residues
MWEQWYPIYSAICYFGSLGLLSLVHVRWVARRFRQFRKLDWAYELVVTWLLAVAWWHGMRQGPVWDTELPGSPLGVRGAL
ALAAVVVAVAAGWRLEQRSRAPGVA
>Mature_105_residues
MWEQWYPIYSAICYFGSLGLLSLVHVRWVARRFRQFRKLDWAYELVVTWLLAVAWWHGMRQGPVWDTELPGSPLGVRGAL
ALAAVVVAVAAGWRLEQRSRAPGVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11995; Mature: 11995

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEQWYPIYSAICYFGSLGLLSLVHVRWVARRFRQFRKLDWAYELVVTWLLAVAWWHGMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGPVWDTELPGSPLGVRGALALAAVVVAVAAGWRLEQRSRAPGVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MWEQWYPIYSAICYFGSLGLLSLVHVRWVARRFRQFRKLDWAYELVVTWLLAVAWWHGMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGPVWDTELPGSPLGVRGALALAAVVVAVAAGWRLEQRSRAPGVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA