Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636091

Identifier: 221636091

GI number: 221636091

Start: 674556

End: 674858

Strand: Reverse

Name: 221636091

Synonym: trd_A0685

Alternate gene names: NA

Gene position: 674858-674556 (Counterclockwise)

Preceding gene: 221636092

Following gene: 221636090

Centisome position: 73.53

GC content: 67.99

Gene sequence:

>303_bases
ATGCTCGCTGCGTTCGTGCTCGGCATGACGCTCGTTCTGGCTGCAATCGTCACCGACGTGCTCATGGCCATCCGGCGCCT
TCGGGTCGGGGACATCGTGCACTGGAGCATCATCGCCATCTGGGGCGGTTGGTTTCTCTGGGACCGTCTCCGCAGCGGAG
AGACGCTGTGGGCCGGCTTACCGCTCTGGGCAGAGGCGACGCTCACGACGCGCTTGCCGGTGGCGGGGCTCGCGTACCGC
GTCGGGGCGCTCGGGCACGCCCGGCGCGAGTGTGCGAAGCATGCTTCTGGCAACACGCACTGA

Upstream 100 bases:

>100_bases
GCAACTGTTGTTGGCAAGATCCGCCGTGGGGACCGTGAGGGAGGCGCGGCGCTCGGCTGGGCTCCTGCAGATGAGACGCG
TTCGTTCGGAGAGGTGTCCG

Downstream 100 bases:

>100_bases
CGGACGTGTGCGAGCCGAGCGGAGCCGCTTTACGAGACCGGCTGGCCGCTCGTCGAGGAACGGTCGGGATGCCGACGGGA
GGAGGTCACGGCTCGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MLAAFVLGMTLVLAAIVTDVLMAIRRLRVGDIVHWSIIAIWGGWFLWDRLRSGETLWAGLPLWAEATLTTRLPVAGLAYR
VGALGHARRECAKHASGNTH

Sequences:

>Translated_100_residues
MLAAFVLGMTLVLAAIVTDVLMAIRRLRVGDIVHWSIIAIWGGWFLWDRLRSGETLWAGLPLWAEATLTTRLPVAGLAYR
VGALGHARRECAKHASGNTH
>Mature_100_residues
MLAAFVLGMTLVLAAIVTDVLMAIRRLRVGDIVHWSIIAIWGGWFLWDRLRSGETLWAGLPLWAEATLTTRLPVAGLAYR
VGALGHARRECAKHASGNTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10988; Mature: 10988

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAFVLGMTLVLAAIVTDVLMAIRRLRVGDIVHWSIIAIWGGWFLWDRLRSGETLWAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
PLWAEATLTTRLPVAGLAYRVGALGHARRECAKHASGNTH
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAAFVLGMTLVLAAIVTDVLMAIRRLRVGDIVHWSIIAIWGGWFLWDRLRSGETLWAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
PLWAEATLTTRLPVAGLAYRVGALGHARRECAKHASGNTH
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA