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The map label for this gene is 221636055

Identifier: 221636055

GI number: 221636055

Start: 640827

End: 641522

Strand: Reverse

Name: 221636055

Synonym: trd_A0649

Alternate gene names: NA

Gene position: 641522-640827 (Counterclockwise)

Preceding gene: 221636056

Following gene: 221636054

Centisome position: 69.9

GC content: 70.11

Gene sequence:

>696_bases
TTGGCTAGCGCTCGGGTGGTCAAGCGTCGCGAAGCGTCGACTGCGGGCGATACGCTGGTCGTCCCGCAGCCGTCACCGCA
CGACCGCGAGTTGGCCGTTCGTCTCCTCGCGGAAGCGGAAGCGCGAGCGGCGGCGATCGTGGCGGCGGCTGAGGAGGAAG
CGCGAGCGATCCGGGCCGCGGTGGAAGCCGAACTCGAGTCGTTGCAGCAGCAGCTGTGGGAGGCCGCACTGGTCGAGGCT
CGTCGTCAGGTGGAGGCAGAACTCGCGGCGGAGCAGCGCGAGCTGCTCGCCCGGTTCCGGGCACTGGTGGAGCGCGCGGT
GTTGCGGGAGGAAGAAATCCGGCAAGCCATGGCGCGCCTGCTGGTGGAACTGAGCGTCCTCGTCGCTGAGACGGTCCTCC
GGCGCGAGGTCGAGCGTGACGGGGAGTTGCTGGGCCGGCTCGCGCAGGCGGCGCTCGAGCATGCGCCGAGCGCCCCAGTG
ACGCACCTCATCGTCCATCCGGAGGATGTGGAGCGAGCGCGCGATTGGTTGGCGCGGGCGTGGAACGGGCGCCCGCCGGT
CGAGGTGGTCGGTGACCAACATGTCGATCGGGGCAGCTGCGTCCTAGGAACACCGGTCGGCTTCGTCGATGCGCGGATCT
CGACGCAGCTGGAGGCAGTGCGACGGGCCCTCTCGGAGGTTGCCGATGACGCTTGA

Upstream 100 bases:

>100_bases
ATCCGGGCGGTCGAGGAGGCGCAGCAGCGGATCGTCTCGATCGTGCGGCGGCTGGAGGAGGCGGAAGAGATCGTGATCTC
GCGGGGCGAGGAGGCGATCC

Downstream 100 bases:

>100_bases
AACAGTACTCGACCGCTTCCGCGACCGCTTACGCGACCTCCAGCCGATCCAGCGCGAGGGGCGGGTCGTCCGGGGCATCG
GGTTGACGGTGGAGGCGATC

Product: type III secretion system protein

Products: NA

Alternate protein names: Type III Secretion System Protein

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAAVEAELESLQQQLWEAALVEA
RRQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARLLVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPV
THLIVHPEDVERARDWLARAWNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA

Sequences:

>Translated_231_residues
MASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAAVEAELESLQQQLWEAALVEA
RRQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARLLVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPV
THLIVHPEDVERARDWLARAWNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA
>Mature_230_residues
ASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAAVEAELESLQQQLWEAALVEAR
RQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARLLVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPVT
HLIVHPEDVERARDWLARAWNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25374; Mature: 25243

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAA
CCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAELESLQQQLWEAALVEARRQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPVTHLIVHPEDVERARDWLARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
WNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA
CCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAA
CCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAELESLQQQLWEAALVEARRQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPVTHLIVHPEDVERARDWLARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
WNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA
CCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA