| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636039
Identifier: 221636039
GI number: 221636039
Start: 623506
End: 623706
Strand: Reverse
Name: 221636039
Synonym: trd_A0633
Alternate gene names: NA
Gene position: 623706-623506 (Counterclockwise)
Preceding gene: 221636045
Following gene: 221636038
Centisome position: 67.96
GC content: 61.69
Gene sequence:
>201_bases GTGCCGGTCGTTGCATCGATCCTCCTCCTCGAAAGTCCGACCCGAACACTCGATACCCGGACATGCCGAAAGCGGCGTCC GTGCAGTCACATTCTCACACAGACCGGGTCGCGTCGTCAAGCGGTCAACCTGTTCGAGAGGCATGTTGGCCGGTGCCAGC GGGTGGACATGGTGCACGATGCGGAAAGACCGGCACGATGA
Upstream 100 bases:
>100_bases GGGCTCGGCTGGGCAGCGGGAGCGGGAGTCGGTGTCGGCTGCGCCTGCTGGCAGGCAGCGAGGACGAACACCAGTGAGAG CAGCAGCATCGTGAACAGTC
Downstream 100 bases:
>100_bases TGGCTCAGACCGTTCGGCAGGTCGCCGTGGGGTGACTGACACGCCGCGGAGCGCGCGGCGATGCCGGGTTTGAAAACGAG AGTGCTCGCTAACGGAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MPVVASILLLESPTRTLDTRTCRKRRPCSHILTQTGSRRQAVNLFERHVGRCQRVDMVHDAERPAR
Sequences:
>Translated_66_residues MPVVASILLLESPTRTLDTRTCRKRRPCSHILTQTGSRRQAVNLFERHVGRCQRVDMVHDAERPAR >Mature_65_residues PVVASILLLESPTRTLDTRTCRKRRPCSHILTQTGSRRQAVNLFERHVGRCQRVDMVHDAERPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7624; Mature: 7493
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVASILLLESPTRTLDTRTCRKRRPCSHILTQTGSRRQAVNLFERHVGRCQRVDMVHD CCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC AERPAR CCCCCC >Mature Secondary Structure PVVASILLLESPTRTLDTRTCRKRRPCSHILTQTGSRRQAVNLFERHVGRCQRVDMVHD CHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC AERPAR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA